Detailed information NTG0668306

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIC96_RS31785
• Genome accession: NZ_CP108938
• Coordinates: 7129349..7130635 (+)
• Length: 428 a.a.
• NCBI ID: WP_330304562.1
• Uniprot ID: A0ABW2VPP3
• Organism: Streptomyces sp. NBC_00775
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7124349..7135635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIC96_RS31755 (OIC96_31790)	-	7124818..7125324 (+)	507	WP_330304565.1	hypothetical protein	-
OIC96_RS31770 (OIC96_31805)	tig	7125954..7127354 (+)	1401	WP_330304564.1	trigger factor	-
OIC96_RS31775 (OIC96_31810)	clpP	7127796..7128401 (+)	606	WP_330310095.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIC96_RS31780 (OIC96_31815)	clpP	7128508..7129188 (+)	681	WP_330304563.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIC96_RS31785 (OIC96_31820)	clpX	7129349..7130635 (+)	1287	WP_330304562.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIC96_RS31790 (OIC96_31825)	-	7130814..7131098 (+)	285	WP_330304561.1	hypothetical protein	-
OIC96_RS31795 (OIC96_31830)	-	7131173..7132111 (-)	939	WP_330304560.1	hypothetical protein	-
OIC96_RS31800 (OIC96_31835)	-	7132248..7134872 (+)	2625	WP_330304559.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47010.83 Da
• Isoelectric Point: 4.8249

>NTDB_id=668306 OIC96_RS31785 WP_330304562.1 7129349..7130635(+) (clpX) [Streptomyces sp. NBC_00775]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=668306 OIC96_RS31785 WP_330304562.1 7129349..7130635(+) (clpX) [Streptomyces sp. NBC_00775]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCACGGGTCAAAACCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGTTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGCGAGGGCGTCCAACAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCCGGCGC
GAAGGGTATCGGCTTCGGTGCGACGATCCGCTCGAAGCGGGAGCTGCAGTCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCGTTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCGCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTTCACTCGAACGTGAACCCGACGCTGATTCCGCGGGACGCTCGCCGCGGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521