Detailed information NTG0668191

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIB37_RS13535
• Genome accession: NZ_CP108882
• Coordinates: 2970054..2971340 (-)
• Length: 428 a.a.
• NCBI ID: WP_330457833.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00820
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2965054..2976340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIB37_RS13525 (OIB37_13545)	-	2966211..2968835 (-)	2625	WP_330457831.1	valine--tRNA ligase	-
OIB37_RS13530 (OIB37_13550)	-	2968974..2969981 (+)	1008	WP_330457832.1	hypothetical protein	-
OIB37_RS13535 (OIB37_13555)	clpX	2970054..2971340 (-)	1287	WP_330457833.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIB37_RS13540 (OIB37_13560)	clpP	2971509..2972174 (-)	666	WP_330461840.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIB37_RS13545 (OIB37_13565)	clpP	2972245..2972850 (-)	606	WP_199273062.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIB37_RS13550 (OIB37_13570)	tig	2973236..2974609 (-)	1374	WP_330457834.1	trigger factor	-
OIB37_RS13565 (OIB37_13585)	-	2975371..2975565 (-)	195	WP_330457835.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46842.63 Da
• Isoelectric Point: 4.6563

>NTDB_id=668191 OIB37_RS13535 WP_330457833.1 2970054..2971340(-) (clpX) [Streptomyces sp. NBC_00820]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIEARAGAKGIGFGATILSKRELEEKDVFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRSDVARVVIT
ADVVHSNVNPTLIPRDARGRGQGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=668191 OIB37_RS13535 WP_330457833.1 2970054..2971340(-) (clpX) [Streptomyces sp. NBC_00820]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GCGAGGTGCGCTGGGAGGAGCTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTGTCGGTAGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGTGCCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTCCTCGGCCCCACGGGCTCGGGCAAGACCCTGCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGGCGCGGGCAGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCTGTCCAAGCGCGAGCTGGAGGAGAAGGACGTCTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACGAGCGTGCACAATCTCGACCGC
GAGGCCCTGCTCCAGATTCTCGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCGGTGATGTACGAGGTCCCGTCCCGCAGCGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTCAACCCGACCCTGATCCCGCGTGATGCCCGCGGCCGGGGCCAGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521