Detailed information NTG0667901

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG70_RS00695
• Genome accession: NZ_CP094168
• Coordinates: 147416..148384 (+)
• Length: 322 a.a.
• NCBI ID: WP_245062262.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe0006
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 142416..153384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG70_RS00665 (MPG70_00665)	panD	143825..144175 (+)	351	WP_000142208.1	aspartate 1-decarboxylase	-
MPG70_RS00670 (MPG70_00670)	-	144186..144479 (+)	294	WP_000347916.1	YbaB/EbfC family nucleoid-associated protein	-
MPG70_RS00675 (MPG70_00675)	-	144479..145474 (+)	996	WP_245062852.1	PDZ domain-containing protein	-
MPG70_RS00680 (MPG70_00680)	comB6	145480..146535 (+)	1056	WP_245062258.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG70_RS00685 (MPG70_00685)	comB7	146551..146676 (+)	126	WP_180655811.1	comB7 lipoprotein	Machinery gene
MPG70_RS00690 (MPG70_00690)	comB8	146673..147416 (+)	744	WP_245062260.1	virB8 family protein	Machinery gene
MPG70_RS00695 (MPG70_00695)	comB9	147416..148384 (+)	969	WP_245062262.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG70_RS00700 (MPG70_00700)	comB10	148377..149513 (+)	1137	WP_245062264.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG70_RS00705 (MPG70_00705)	-	149582..150994 (+)	1413	WP_245062266.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG70_RS00710 (MPG70_00710)	gmd	151008..152153 (+)	1146	WP_180419622.1	GDP-mannose 4,6-dehydratase	-
MPG70_RS00715 (MPG70_00715)	-	152146..153078 (+)	933	WP_245062267.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 322 a.a.
• Molecular weight: 37028.57 Da
• Isoelectric Point: 9.2453

>NTDB_id=667901 MPG70_RS00695 WP_245062262.1 147416..148384(+) (comB9) [Helicobacter pylori strain Hpfe0006]
MRKVLCTLVGFLLAFNALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDRN
YYSNAFMKPQNKENTLENAPTNNKPLKEEKEETKEKEEETITIGDSTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKK
SKLSLMPEEIFNDKQFTYFKFDKKLALSKFPVVYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFIKKGK
DE

Nucleotide

• Length: 969 bp

>NTDB_id=667901 MPG70_RS00695 WP_245062262.1 147416..148384(+) (comB9) [Helicobacter pylori strain Hpfe0006]
ATGCGTAAGGTTTTATGCACTCTTGTGGGCTTTTTGTTGGCTTTTAACGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCAGCGAATTTAAACCACCCCATGCAAGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGTTTTGATGCGAAAATATTAGAAAG
TAACGATCGCATTTTGCTCATCAAGCCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACTACTTTCACCAGTTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAGAAAT
TATTATTCCAACGCTTTTATGAAGCCGCAAAACAAAGAAAATACCCTTGAAAATGCCCCCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAAAAGAAGAAGAAACTATAACGATTGGCGATAGCACTAATGCAATGAAAATCGTTA
AAAAAGACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAA
TCCAAACTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCT
CTCCAAATTCCCGGTGGTTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTACATTA
TCGCTGAAGATGTTTCGGCTAAATGGACTTTAAGATTAGGTAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAA
GATGAATAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-313)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	93.252	100	0.944