Detailed information NTG0667469

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG936_RS10410
• Genome accession: NZ_CP108846
• Coordinates: 2252867..2254165 (-)
• Length: 432 a.a.
• NCBI ID: WP_383756186.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00846
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2247867..2259165

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG936_RS10400 (OG936_10425)	-	2248971..2251619 (-)	2649	WP_406494083.1	valine--tRNA ligase	-
OG936_RS10405 (OG936_10430)	-	2251774..2252790 (+)	1017	WP_406494084.1	hypothetical protein	-
OG936_RS10410 (OG936_10435)	clpX	2252867..2254165 (-)	1299	WP_383756186.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG936_RS10415 (OG936_10440)	clpP	2254323..2255003 (-)	681	WP_383756184.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG936_RS10420 (OG936_10445)	-	2255085..2255693 (-)	609	WP_406500390.1	ATP-dependent Clp protease proteolytic subunit	-
OG936_RS10425 (OG936_10450)	tig	2255957..2257372 (-)	1416	WP_406494086.1	trigger factor	-
OG936_RS10440 (OG936_10465)	-	2257985..2258179 (-)	195	WP_266746187.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47215.01 Da
• Isoelectric Point: 4.8824

>NTDB_id=667469 OG936_RS10410 WP_383756186.1 2252867..2254165(-) (clpX) [Streptomyces sp. NBC_00846]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=667469 OG936_RS10410 WP_383756186.1 2252867..2254165(-) (clpX) [Streptomyces sp. NBC_00846]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCCCAGGGCCG
GGACGACGGCATCGAACTGGCCAAGTCCAACATCCTGTTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAACGCCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGTCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTGCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509