Detailed information NTG0667321

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG57_RS00740
• Genome accession: NZ_CP094132
• Coordinates: 153728..154690 (+)
• Length: 320 a.a.
• NCBI ID: WP_245081242.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe051
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 148728..159690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG57_RS00710 (MPG57_00710)	panD	150135..150485 (+)	351	WP_245081236.1	aspartate 1-decarboxylase	-
MPG57_RS00715 (MPG57_00715)	-	150496..150789 (+)	294	WP_000347923.1	YbaB/EbfC family nucleoid-associated protein	-
MPG57_RS00720 (MPG57_00720)	-	150789..151784 (+)	996	WP_245081760.1	PDZ domain-containing protein	-
MPG57_RS00725 (MPG57_00725)	comB6	151792..152847 (+)	1056	WP_245081238.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG57_RS00730 (MPG57_00730)	comB7	152863..152988 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG57_RS00735 (MPG57_00735)	comB8	152985..153728 (+)	744	WP_245081240.1	virB8 family protein	Machinery gene
MPG57_RS00740 (MPG57_00740)	comB9	153728..154690 (+)	963	WP_245081242.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG57_RS00745 (MPG57_00745)	comB10	154683..155819 (+)	1137	WP_245081243.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG57_RS00750 (MPG57_00750)	-	155889..157301 (+)	1413	WP_245081245.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG57_RS00755 (MPG57_00755)	gmd	157316..158461 (+)	1146	WP_245081246.1	GDP-mannose 4,6-dehydratase	-
MPG57_RS00760 (MPG57_00760)	-	158454..159386 (+)	933	WP_245081247.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36739.36 Da
• Isoelectric Point: 9.3756

>NTDB_id=667321 MPG57_RS00740 WP_245081242.1 153728..154690(+) (comB9) [Helicobacter pylori strain Hpfe051]
MRKVLCALVGFLLVFSALKADDSLEEANETAPVNLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKALTNNKPLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFVKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=667321 MPG57_RS00740 WP_245081242.1 153728..154690(+) (comB9) [Helicobacter pylori strain Hpfe051]
ATGCGTAAGGTTTTATGCGCTCTTGTGGGCTTTTTATTGGTTTTTAGCGCTTTAAAAGCCGATGATTCTTTAGAAGAAGC
TAACGAAACAGCCCCGGTGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGTTTTGATGCGAAAATTTTAGAAAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAACCGCAAAACAAAGAAAATACCCTTGAAAAGGCCCTCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGCTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTCAACGATAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTCTAA
ATTCCCGGTGATTTACAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTACATTATCGCTG
AAGATGTCTCGGCTAAATGGACTTTAAGATTAGGTAAGGACTATTTGTGTATCCGTTTTGTCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	92.025	100	0.938