Detailed information NTG0667169

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG73_RS00755
• Genome accession: NZ_CP094122
• Coordinates: 152763..153725 (+)
• Length: 320 a.a.
• NCBI ID: WP_245057211.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe058
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 147763..158725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG73_RS00725 (MPG73_00725)	panD	149170..149520 (+)	351	WP_245057207.1	aspartate 1-decarboxylase	-
MPG73_RS00730 (MPG73_00730)	-	149531..149824 (+)	294	WP_000347917.1	YbaB/EbfC family nucleoid-associated protein	-
MPG73_RS00735 (MPG73_00735)	-	149824..150819 (+)	996	WP_245057857.1	PDZ domain-containing protein	-
MPG73_RS00740 (MPG73_00740)	comB6	150827..151882 (+)	1056	WP_245057209.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG73_RS00745 (MPG73_00745)	comB7	151898..152023 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG73_RS00750 (MPG73_00750)	comB8	152020..152763 (+)	744	WP_000660522.1	virB8 family protein	Machinery gene
MPG73_RS00755 (MPG73_00755)	comB9	152763..153725 (+)	963	WP_245057211.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG73_RS00760 (MPG73_00760)	comB10	153718..154854 (+)	1137	WP_245057212.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG73_RS00765 (MPG73_00765)	-	154924..156336 (+)	1413	WP_245057214.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG73_RS00770 (MPG73_00770)	gmd	156351..157496 (+)	1146	WP_031214491.1	GDP-mannose 4,6-dehydratase	-
MPG73_RS00775 (MPG73_00775)	-	157489..158421 (+)	933	WP_245057216.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36831.46 Da
• Isoelectric Point: 9.3756

>NTDB_id=667169 MPG73_RS00755 WP_245057211.1 152763..153725(+) (comB9) [Helicobacter pylori strain Hpfe058]
MRKVLCTLVGFLLAFSVLKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTFEKAPTNNKPLKEEKEETKEEEIITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFVKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=667169 MPG73_RS00755 WP_245057211.1 152763..153725(+) (comB9) [Helicobacter pylori strain Hpfe058]
ATGCGTAAGGTTTTATGCACTCTTGTGGGTTTTTTGTTGGCTTTTAGCGTTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCTGCGAATTTAAACCACCCCATGCAGGATTTAAACGCTATTCAAGGGAGCTTTTTTGATAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGTTTTGATGCGAAAATTTTAGAAAG
TAACGATCGTATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCACAAAACAAAGAAAATACCTTTGAAAAGGCCCCCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGATTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACCTATTTCAAATTTGACAAAAAATTAGCGCTCTCTAA
ATTCCCGGTGATCTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTACATTATCGCTG
AAGATGTTTCGGCTAAATGGACTTTAAGGTTGGGCAAGGACTATTTGTGTATCCGTTTTGTCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	91.718	100	0.934