Detailed information NTG0666936

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG17_RS00735
• Genome accession: NZ_CP094107
• Coordinates: 154643..155608 (+)
• Length: 321 a.a.
• NCBI ID: WP_245017948.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe074
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 149643..160608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG17_RS00705 (MPG17_00705)	panD	151057..151410 (+)	354	WP_245017947.1	aspartate 1-decarboxylase	-
MPG17_RS00710 (MPG17_00710)	-	151413..151706 (+)	294	WP_000347923.1	YbaB/EbfC family nucleoid-associated protein	-
MPG17_RS00715 (MPG17_00715)	-	151706..152701 (+)	996	WP_245018274.1	PDZ domain-containing protein	-
MPG17_RS00720 (MPG17_00720)	comB6	152707..153762 (+)	1056	WP_245018275.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG17_RS00725 (MPG17_00725)	comB7	153778..153903 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG17_RS00730 (MPG17_00730)	comB8	153900..154643 (+)	744	WP_120935466.1	virB8 family protein	Machinery gene
MPG17_RS00735 (MPG17_00735)	comB9	154643..155608 (+)	966	WP_245017948.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG17_RS00740 (MPG17_00740)	comB10	155601..156737 (+)	1137	WP_245017949.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG17_RS00745 (MPG17_00745)	-	156803..158215 (+)	1413	WP_245017950.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG17_RS00750 (MPG17_00750)	gmd	158229..159374 (+)	1146	WP_245017951.1	GDP-mannose 4,6-dehydratase	-
MPG17_RS00755 (MPG17_00755)	-	159367..160299 (+)	933	WP_245017952.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 36931.53 Da
• Isoelectric Point: 9.3756

>NTDB_id=666936 MPG17_RS00735 WP_245017948.1 154643..155608(+) (comB9) [Helicobacter pylori strain Hpfe074]
MRKVLCALVGFLLAFSVLKADDFLEETNETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKAPTNNNKSLKEEKEETKEEETITIGDNTNVMKIVKKDIQKGYRALKSSQRKWYCLGICSKKS
KLSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFIKKGKD
E

Nucleotide

• Length: 966 bp

>NTDB_id=666936 MPG17_RS00735 WP_245017948.1 154643..155608(+) (comB9) [Helicobacter pylori strain Hpfe074]
ATGCGTAAGGTTTTATGCGCTCTTGTGGGTTTTTTGTTGGCTTTTAGCGTTTTAAAAGCCGATGATTTTTTAGAAGAAAC
TAACGAAACAGCCCCTGCGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGATAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTATTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCGAAAATCTTAGAAAG
CAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCGCAAAACAAAGAAAATACCCTTGAAAAGGCCCCCACAAACAATAACAAATCCTT
AAAAGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACGATTGGCGATAACACTAATGTAATGAAAATCGTTAAAA
AAGACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCC
AAACTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTC
TAAATTCCCGGTGATTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGAATTGTGGGCGATTACATTATCG
CTGAAGATGTCTCGGCTAAATGGACTTTAAGATTAGGCAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGAT
GAATAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	90.798	100	0.922