Detailed information NTG0666714

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG806_RS17820
• Genome accession: NZ_CP108797
• Coordinates: 3944641..3945927 (-)
• Length: 428 a.a.
• NCBI ID: WP_020116380.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00882
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3939641..3950927

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG806_RS17810 (OG806_17800)	-	3940772..3943396 (-)	2625	WP_328638610.1	valine--tRNA ligase	-
OG806_RS17815 (OG806_17805)	-	3943533..3944570 (+)	1038	WP_406157446.1	hypothetical protein	-
OG806_RS17820 (OG806_17810)	clpX	3944641..3945927 (-)	1287	WP_020116380.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG806_RS17825 (OG806_17815)	clpP	3946088..3946768 (-)	681	WP_020136160.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG806_RS17830 (OG806_17820)	clpP	3946818..3947426 (-)	609	WP_059205342.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG806_RS17835 (OG806_17825)	tig	3947704..3949104 (-)	1401	WP_371567269.1	trigger factor	-
OG806_RS17845 (OG806_17835)	-	3949651..3949887 (-)	237	WP_406157448.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46784.49 Da
• Isoelectric Point: 4.7809

>NTDB_id=666714 OG806_RS17820 WP_020116380.1 3944641..3945927(-) (clpX) [Streptomyces sp. NBC_00882]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=666714 OG806_RS17820 WP_020116380.1 3944641..3945927(-) (clpX) [Streptomyces sp. NBC_00882]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGCTATGTGGTGGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCCGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCAGCAGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCGCAGA
CACTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCGACAGCGCTCACTGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGTGAAAACCCGTCGATCACGCGGGACGTGAGCGGCGAGGGTGTGCAGCAGGCGC
TCCTGAAGATCCTCGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAACTCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCCCTCCTCCAGATCCTGGTCGAGCCCCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTCCAGGGCGTCATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTCAACCCGACGCTGATCCCGCGGGACGCGCGCGGGCGGGGCTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523