Detailed information NTG0666035

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MO986_RS01985
• Genome accession: NZ_CP093967
• Coordinates: 424291..425439 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain NY4605
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 419291..430439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MO986_RS01960 (MO986_01960)	-	420442..420738 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
MO986_RS01965 (MO986_01965)	-	420735..421328 (-)	594	WP_003084544.1	YggT family protein	-
MO986_RS01970 (MO986_01970)	proC	421339..422160 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
MO986_RS01975 (MO986_01975)	-	422172..422864 (-)	693	WP_003459261.1	YggS family pyridoxal phosphate-dependent enzyme	-
MO986_RS01980 (MO986_01980)	pilT	423079..424113 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
MO986_RS01985 (MO986_01985)	pilU	424291..425439 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
MO986_RS01990 (MO986_01990)	czcD	425447..426346 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
MO986_RS01995 (MO986_01995)	-	426501..426905 (+)	405	WP_003084560.1	NINE protein	-
MO986_RS02000 (MO986_02000)	-	427148..428521 (+)	1374	WP_003084562.1	pyridoxal-phosphate dependent enzyme	-
MO986_RS02005 (MO986_02005)	-	428518..429702 (+)	1185	WP_003110017.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=666035 MO986_RS01985 WP_003100959.1 424291..425439(+) (pilU) [Pseudomonas aeruginosa strain NY4605]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=666035 MO986_RS01985 WP_003100959.1 424291..425439(+) (pilU) [Pseudomonas aeruginosa strain NY4605]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGTCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382