Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG462_RS31925 Genome accession   NZ_CP108669
Coordinates   7035254..7036042 (-) Length   262 a.a.
NCBI ID   WP_030325322.1    Uniprot ID   A0ABW6XU99
Organism   Streptomyces sp. NBC_01077     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7030254..7041042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG462_RS31910 (OG462_31880) - 7030445..7031131 (+) 687 WP_406062904.1 GNAT family N-acetyltransferase -
  OG462_RS31915 (OG462_31885) - 7031199..7033118 (+) 1920 WP_406062906.1 IucA/IucC family protein -
  OG462_RS31920 (OG462_31890) - 7033169..7035142 (+) 1974 WP_406062908.1 ATP-dependent DNA helicase -
  OG462_RS31925 (OG462_31895) dinR/lexA 7035254..7036042 (-) 789 WP_030325322.1 transcriptional repressor LexA Regulator
  OG462_RS31930 (OG462_31900) nrdR 7036480..7036989 (+) 510 WP_030325324.1 transcriptional regulator NrdR -
  OG462_RS31935 (OG462_31905) - 7037160..7040054 (+) 2895 WP_406062910.1 vitamin B12-dependent ribonucleotide reductase -
  OG462_RS31940 (OG462_31910) - 7040134..7040664 (-) 531 WP_406062912.1 TerD family protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 28354.09 Da        Isoelectric Point: 6.9852

>NTDB_id=664780 OG462_RS31925 WP_030325322.1 7035254..7036042(-) (dinR/lexA) [Streptomyces sp. NBC_01077]
MTTTADSATITAQDRSQGRLEPVHAMNDTSMNGEDPGRPARALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPS
MREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAEES
VEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAA
YQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 789 bp        

>NTDB_id=664780 OG462_RS31925 WP_030325322.1 7035254..7036042(-) (dinR/lexA) [Streptomyces sp. NBC_01077]
GTGACCACCACCGCAGACAGTGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCACGCCATGAA
TGACACAAGCATGAACGGCGAGGACCCCGGGCGACCTGCCCGGGCCCTCCCCGGGCGACCTCCAGGCATCCGAGCCGACA
GCTCCGGTCTCACCGACCGGCAGCGCAGGGTCATCGAGGTCATCCGTGACTCGGTCCAGCGGCGCGGCTACCCGCCGTCG
ATGCGCGAGATCGGACAGGCGGTCGGCCTGTCCAGCACGTCCTCGGTGGCACACCAGCTCATGGCGCTGGAGCGCAAGGG
CTTCCTCCGCCGTGACCCGCACCGCCCCCGGGCCTACGAGGTGCGCGGCTCCGACCAGCCGAGCACCCAGCCGACCGACA
CCACGGGCAAGCCCGCCGCGTCGTACGTCCCCCTGGTCGGCCGGATCGCGGCCGGTGGCCCGATCCTCGCCGAGGAGTCC
GTCGAGGACGTCTTCCCCCTCCCGCGGCAGCTGGTCGGGGACGGCGAGCTGTTCGTCCTCAAGGTCGTCGGCGACTCGAT
GATCGAGGCCGCCATCTGTGACGGCGACTGGGTCACCGTCCGGCGGCAGCCCGTCGCGGAGAACGGCGACATCGTCGCGG
CCATGCTGGACGGCGAGGCCACGGTCAAGCGCTTCAAGCGCGAAGACGGTCACGTCTGGCTGCTCCCGCACAATGCGGCG
TACCAGCCGATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTGGTGGCGGTACTGCGGCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(144-256)

LexA DNA binding domain (LexA_DNA_bind)

(55-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.916

0.374