Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MOV10_RS14520 Genome accession   NZ_CP093445
Coordinates   2944766..2945371 (-) Length   201 a.a.
NCBI ID   WP_103107080.1    Uniprot ID   A0A8T9IE72
Organism   Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2939766..2950371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOV10_RS14505 (MOV10_14505) helD 2939983..2942037 (-) 2055 WP_021000159.1 DNA helicase IV -
  MOV10_RS14510 (MOV10_14510) - 2942161..2942607 (+) 447 WP_001261222.1 YccF domain-containing protein -
  MOV10_RS14515 (MOV10_14515) yccS 2942626..2944779 (+) 2154 WP_000950881.1 YccS family putative transporter -
  MOV10_RS14520 (MOV10_14520) sxy/tfoX 2944766..2945371 (-) 606 WP_103107080.1 TfoX/Sxy family DNA transformation protein Regulator
  MOV10_RS14525 (MOV10_14525) sulA 2945588..2946097 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  MOV10_RS14530 (MOV10_14530) ompA 2946454..2947506 (+) 1053 WP_001670727.1 porin OmpA -
  MOV10_RS14535 (MOV10_14535) matP 2947578..2948030 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  MOV10_RS14540 (MOV10_14540) - 2948216..2949976 (+) 1761 WP_242105191.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23202.99 Da        Isoelectric Point: 8.7403

>NTDB_id=664702 MOV10_RS14520 WP_103107080.1 2944766..2945371(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWVHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=664702 MOV10_RS14520 WP_103107080.1 2944766..2945371(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Abeokuta strain OG19FER4]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGTTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.377

99.005

0.746