Detailed information NTG0664218

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG368_RS25090
• Genome accession: NZ_CP108643
• Coordinates: 5651435..5652721 (+)
• Length: 428 a.a.
• NCBI ID: WP_061444769.1
• Uniprot ID: A0ABW8BH06
• Organism: Streptomyces sp. NBC_01124
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5646435..5657721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG368_RS25060 (OG368_25040)	-	5647400..5647594 (+)	195	WP_007449834.1	hypothetical protein	-
OG368_RS25075 (OG368_25055)	tig	5648145..5649542 (+)	1398	WP_125631668.1	trigger factor	-
OG368_RS25080 (OG368_25060)	clpP	5649873..5650478 (+)	606	WP_051005918.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG368_RS25085 (OG368_25065)	clpP	5650529..5651242 (+)	714	WP_102927978.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG368_RS25090 (OG368_25070)	clpX	5651435..5652721 (+)	1287	WP_061444769.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG368_RS25095 (OG368_25075)	-	5652795..5653763 (-)	969	WP_197924304.1	hypothetical protein	-
OG368_RS25100 (OG368_25080)	-	5653902..5656526 (+)	2625	WP_315978480.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46770.55 Da
• Isoelectric Point: 4.7788

>NTDB_id=664218 OG368_RS25090 WP_061444769.1 5651435..5652721(+) (clpX) [Streptomyces sp. NBC_01124]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=664218 OG368_RS25090 WP_061444769.1 5651435..5652721(+) (clpX) [Streptomyces sp. NBC_01124]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GCGAGGTGCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCCCAGGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCCATCACGCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGGGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCGGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCGCGGGATTCGCGGGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521