Detailed information NTG0066407

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R36_RS23565
• Genome accession: NZ_AP022161
• Coordinates: 4922980..4924005 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP5-S18-ESBL-08
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4917980..4929005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R36_RS23555 (WP5S18E08_45920)	rpmE	4920211..4920423 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R36_RS23560 (WP5S18E08_45930)	priA	4920626..4922824 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
H7R36_RS23565 (WP5S18E08_45940)	cytR	4922980..4924005 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R36_RS23570 (WP5S18E08_45950)	ftsN	4924097..4925056 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R36_RS23575 (WP5S18E08_45960)	hslV	4925149..4925679 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R36_RS23580 (WP5S18E08_45970)	hslU	4925689..4927020 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R36_RS23585 (WP5S18E08_45980)	menA	4927087..4928013 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R36_RS23590 (WP5S18E08_45990)	rraA	4928106..4928591 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R36_RS23595 (WP5S18E08_46000)	zapB	4928676..4928921 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=66407 H7R36_RS23565 WP_000644904.1 4922980..4924005(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-08]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=66407 H7R36_RS23565 WP_000644904.1 4922980..4924005(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-08]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628