Detailed information NTG0663333

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG220_RS12895
• Genome accession: NZ_CP108582
• Coordinates: 2869456..2870739 (-)
• Length: 427 a.a.
• NCBI ID: WP_326692942.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01187
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2864456..2875739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG220_RS12885 (OG220_12855)	-	2867161..2868192 (+)	1032	WP_326690390.1	hypothetical protein	-
OG220_RS12890 (OG220_12860)	-	2868463..2869308 (+)	846	WP_405803611.1	hypothetical protein	-
OG220_RS12895 (OG220_12865)	clpX	2869456..2870739 (-)	1284	WP_326692942.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG220_RS12900 (OG220_12870)	clpP	2870903..2871562 (-)	660	WP_326690388.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG220_RS12905 (OG220_12875)	clpP	2871630..2872235 (-)	606	WP_326692941.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG220_RS12910 (OG220_12880)	tig	2872507..2873949 (-)	1443	WP_326690387.1	trigger factor	-
OG220_RS12925 (OG220_12895)	-	2874576..2874770 (-)	195	WP_326690386.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46797.42 Da
• Isoelectric Point: 4.7396

>NTDB_id=663333 OG220_RS12895 WP_326692942.1 2869456..2870739(-) (clpX) [Streptomyces sp. NBC_01187]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWDELPKPREISEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENTPGRDDGIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFAGLEKIIESRAGAKGIGFGADIRSKREIEASNQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILMEPKNALIKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVERVVITEE
VVHSNVNPTLVPRARGNGDQQHHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=663333 OG220_RS12895 WP_326692942.1 2869456..2870739(-) (clpX) [Streptomyces sp. NBC_01187]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCAGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGTCCT
CCGAGGTGCGCTGGGACGAGCTTCCCAAGCCGCGTGAGATCTCTGAGTTCCTGGAGGGCTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACACCCCGGGGCGCGACGA
CGGCATCGAGCTGTCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGACGCTCG
CCCGGATGCTCAACGTCCCCTTCGCCATTGCCGACGCCACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGAGAT
CGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGCGATGTCTCCGGTGAAGGTGTCCAGCAGGCGCTGCTGA
AGATCCTGGAGGGCACGACAGCCTCCGTGCCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACGACGAACGTGCTGTTCATCGTCGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCCCGCGCGGGCGCCAAGGG
CATCGGCTTCGGTGCCGACATCCGCTCCAAGCGCGAGATCGAGGCGAGCAACCAGTTCGAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCCGTCCACAACCTCGACCGCGAGGCG
CTGCTCCAGATCCTGATGGAGCCGAAGAACGCCTTGATCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGTGGAGCT
GGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGGGGCACCGGAGCGCGCGGGCTGCGCGCCA
TCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCCTCCCGCAAGGACGTGGAGCGCGTCGTGATCACCGAAGAG
GTCGTCCACTCCAACGTGAACCCGACCCTGGTGCCGCGGGCCCGTGGCAACGGGGACCAGCAGCACCACGAGAAGAGCGC
CTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.5	93.677	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.257	95.785	0.529