Detailed information NTG0663270

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG519_RS10215
• Genome accession: NZ_CP108580
• Coordinates: 2436783..2438066 (-)
• Length: 427 a.a.
• NCBI ID: WP_405581556.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01190
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2431783..2443066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG519_RS10205 (OG519_10180)	-	2433056..2435683 (-)	2628	WP_405581552.1	valine--tRNA ligase	-
OG519_RS10210 (OG519_10185)	-	2435799..2436704 (+)	906	WP_405581554.1	hypothetical protein	-
OG519_RS10215 (OG519_10190)	clpX	2436783..2438066 (-)	1284	WP_405581556.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG519_RS10220 (OG519_10195)	clpP	2438241..2438924 (-)	684	WP_405581557.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG519_RS10225 (OG519_10200)	clpP	2439034..2439648 (-)	615	WP_405592608.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG519_RS10230 (OG519_10205)	tig	2440131..2441543 (-)	1413	WP_405581560.1	trigger factor	-
OG519_RS10245 (OG519_10220)	-	2442578..2443030 (-)	453	WP_405581562.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46752.73 Da
• Isoelectric Point: 4.9984

>NTDB_id=663270 OG519_RS10215 WP_405581556.1 2436783..2438066(-) (clpX) [Streptomyces sp. NBC_01190]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEDLPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGESGRPGHDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDV
ENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIEARAGAKGIGFGATIRSKRELNMANQFSEIMPEDLVKFGMIPEFIGRLPVITNVHNLDRE
ALLQILVEPRNALVKQYQKLFELDGVELEFERAALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVITA
DVVHSNVNPTLVPREPRVIGKGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=663270 OG519_RS10215 WP_405581556.1 2436783..2438066(-) (clpX) [Streptomyces sp. NBC_01190]
GTGGCACGCATCGGTGACGGTGGAGACCTGCTGAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCGGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAATCCT
CCGAGGTGCGGTGGGAGGATCTGCCCAAGCCGCGGGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCTCTGTCCGTCGCGGTCTACAACCACTACAAGCGCGTTCAGGCGGGCGAGAGCGGCCGTCCGGGACATGA
CGACGCCATCGAACTGGCCAAGTCGAACATCCTGCTGCTGGGCCCGACCGGCTCCGGCAAGACGCTGCTCGCCCAGACCC
TGGCCCGGATGCTCAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCCGGCTATGTCGGGGAGGACGTC
GAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGA
GATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCCGGGATGTCTCCGGCGAGGGTGTGCAGCAGGCACTGC
TGAAGATCCTGGAGGGCACCACCGCATCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACCACCAACGTGCTCTTCATCGTCGGTGGCGCGTTCGCCGGTCTGGAGAAGATCATCGAGGCCCGCGCGGGCGCCAA
GGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGCGAGCTGAACATGGCCAATCAGTTCTCCGAGATCATGCCGGAGG
ACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCAACGTGCACAACCTGGACCGCGAG
GCACTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAGAAGCTCTTCGAACTCGACGGTGTGGA
GCTGGAGTTCGAGCGCGCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACCGGCGCCCGGGGCCTGCGCG
CCATCATGGAAGAGGTGCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACCGCG
GATGTCGTGCACTCCAACGTCAACCCCACCCTGGTGCCGCGGGAACCGCGGGTCATCGGCAAGGGCGAGCAGAAGAGCGC
GTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.591	93.911	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.854	96.487	0.529