Detailed information NTG0662971

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG573_RS07620
• Genome accession: NZ_CP108557
• Coordinates: 1634852..1636138 (-)
• Length: 428 a.a.
• NCBI ID: WP_030297265.1
• Uniprot ID: A0ABN0VAM4
• Organism: Streptomyces sp. NBC_01205
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1629852..1641138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG573_RS07610 (OG573_07610)	-	1631044..1633665 (-)	2622	WP_327283421.1	valine--tRNA ligase	-
OG573_RS07615 (OG573_07615)	-	1633795..1634739 (+)	945	WP_327283422.1	hypothetical protein	-
OG573_RS07620 (OG573_07620)	clpX	1634852..1636138 (-)	1287	WP_030297265.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG573_RS07625 (OG573_07625)	clpP	1636292..1636963 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG573_RS07630 (OG573_07630)	clpP	1637050..1637667 (-)	618	WP_327283423.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG573_RS07635 (OG573_07635)	tig	1638000..1639382 (-)	1383	WP_327283424.1	trigger factor	-
OG573_RS07650 (OG573_07650)	-	1639964..1640475 (+)	512	Protein_1504	replication initiator	-
OG573_RS07655 (OG573_07655)	-	1640468..1640668 (+)	201	WP_327283425.1	excisionase family DNA-binding protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46909.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=662971 OG573_RS07620 WP_030297265.1 1634852..1636138(-) (clpX) [Streptomyces sp. NBC_01205]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=662971 OG573_RS07620 WP_030297265.1 1634852..1636138(-) (clpX) [Streptomyces sp. NBC_01205]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTCGCCCAAA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCTGACGCGACGGCGCTGACGGAGGCCGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCTTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACTTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCGCTCGAACGTCAACCCGACGCTGGTCCCGCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519