Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MNG38_RS06550 Genome accession   NZ_CP093289
Coordinates   1249668..1250819 (+) Length   383 a.a.
NCBI ID   WP_044052564.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1244668..1255819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS06515 (MNG38_06515) yjbB 1245340..1246557 (+) 1218 WP_080019554.1 MFS transporter -
  MNG38_RS06520 (MNG38_06520) yjbC 1246721..1247299 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  MNG38_RS06525 (MNG38_06525) spx 1247480..1247875 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MNG38_RS06530 (MNG38_06530) yjbE 1247918..1248574 (-) 657 WP_015252355.1 TerC family protein -
  MNG38_RS06535 (MNG38_06535) - 1248744..1248884 (+) 141 WP_119122854.1 hypothetical protein -
  MNG38_RS06540 (MNG38_06540) mecA 1248851..1249507 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  MNG38_RS06545 (MNG38_06545) - 1249502..1249624 (-) 123 WP_003245684.1 hypothetical protein -
  MNG38_RS06550 (MNG38_06550) coiA 1249668..1250819 (+) 1152 WP_044052564.1 competence protein CoiA Machinery gene
  MNG38_RS06555 (MNG38_06555) pepF 1251049..1252878 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  MNG38_RS06560 (MNG38_06560) - 1252916..1253083 (-) 168 WP_003244944.1 hypothetical protein -
  MNG38_RS06565 (MNG38_06565) spxH 1253397..1254296 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  MNG38_RS06570 (MNG38_06570) bhbI 1254293..1254691 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MNG38_RS06575 (MNG38_06575) cwlQ 1254946..1255680 (-) 735 WP_033883583.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44918.04 Da        Isoelectric Point: 9.9417

>NTDB_id=662973 MNG38_RS06550 WP_044052564.1 1249668..1250819(+) (coiA) [Bacillus subtilis strain H2]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=662973 MNG38_RS06550 WP_044052564.1 1249668..1250819(+) (coiA) [Bacillus subtilis strain H2]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963