Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MM522_RS15695 Genome accession   NZ_CP093067
Coordinates   3044683..3045840 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain ATC-3     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3039683..3050840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS15665 (MM522_15665) yvyF 3039937..3040356 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MM522_RS15670 (MM522_15670) comFC 3040429..3041151 (-) 723 WP_033884179.1 comF operon protein ComFC Machinery gene
  MM522_RS15675 (MM522_15675) comFB 3041115..3041411 (-) 297 WP_014478130.1 late competence protein ComFB -
  MM522_RS15680 (MM522_15680) comFA 3041471..3042862 (-) 1392 WP_101172232.1 ATP-dependent helicase ComFA Machinery gene
  MM522_RS15685 (MM522_15685) fakBA 3042968..3043813 (-) 846 WP_003244125.1 DegV family protein -
  MM522_RS15690 (MM522_15690) degU 3043911..3044600 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MM522_RS15695 (MM522_15695) degS 3044683..3045840 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  MM522_RS15700 (MM522_15700) yvyE 3046057..3046710 (+) 654 WP_003227979.1 YigZ family protein -
  MM522_RS15705 (MM522_15705) tagV 3046710..3047885 (+) 1176 WP_029318786.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  MM522_RS15710 (MM522_15710) tagO 3047958..3049034 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  MM522_RS15715 (MM522_15715) tuaH 3049179..3050372 (-) 1194 WP_080265414.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=661870 MM522_RS15695 WP_003227983.1 3044683..3045840(-) (degS) [Bacillus subtilis strain ATC-3]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=661870 MM522_RS15695 WP_003227983.1 3044683..3045840(-) (degS) [Bacillus subtilis strain ATC-3]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1