Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicR   Type   Regulator
Locus tag   ML603_RS02730 Genome accession   NZ_CP092887
Coordinates   523857..524564 (+) Length   235 a.a.
NCBI ID   WP_241067493.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 518857..529564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS02705 (ML603_02705) ftsY 519418..520968 (+) 1551 WP_241067491.1 signal recognition particle-docking protein FtsY -
  ML603_RS02710 (ML603_02710) - 521094..521909 (-) 816 WP_003060657.1 TIGR03943 family protein -
  ML603_RS02715 (ML603_02715) - 521909..522811 (-) 903 WP_048327672.1 permease -
  ML603_RS02720 (ML603_02720) - 522964..523113 (-) 150 WP_164714918.1 SPJ_0845 family protein -
  ML603_RS02725 (ML603_02725) - 523288..523770 (+) 483 WP_241067492.1 cupin domain-containing protein -
  ML603_RS02730 (ML603_02730) vicR 523857..524564 (+) 708 WP_241067493.1 response regulator transcription factor Regulator
  ML603_RS02735 (ML603_02735) - 524565..525893 (+) 1329 WP_241067494.1 ATP-binding protein -
  ML603_RS02740 (ML603_02740) - 526060..526935 (+) 876 WP_241067495.1 substrate-binding domain-containing protein -
  ML603_RS02745 (ML603_02745) pstC 527053..527916 (+) 864 WP_241067496.1 phosphate ABC transporter permease subunit PstC -
  ML603_RS02750 (ML603_02750) pstA 527909..528724 (+) 816 WP_241067497.1 phosphate ABC transporter permease PstA -
  ML603_RS02755 (ML603_02755) pstB 528726..529478 (+) 753 WP_111715740.1 phosphate ABC transporter ATP-binding protein PstB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27459.61 Da        Isoelectric Point: 5.2462

>NTDB_id=660924 ML603_RS02730 WP_241067493.1 523857..524564(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MTKQILLVDDEEHILRLLDYHLSKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELVARVKAILRRTSNEQQEDDTDDLRDDYRVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKEL

Nucleotide


Download         Length: 708 bp        

>NTDB_id=660924 ML603_RS02730 WP_241067493.1 523857..524564(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCAGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACCCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTAGAATTAGGAGCTGATGATTACCTGACAAAACCTTTTAGCCC
TAGAGAATTAGTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAACGAGCAGCAAGAAGATGACACAGATGATCTCA
GGGATGATTATCGGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTGTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACCTTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAACCCTAAAGACCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(159-232)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicR Streptococcus mutans UA159

49.145

99.574

0.489
  micA Streptococcus pneumoniae Cp1015

47.619

98.298

0.468
  covR Lactococcus lactis subsp. lactis strain DGCC12653

40.773

99.149

0.404
  covR Streptococcus salivarius strain HSISS4

39.744

99.574

0.396