Detailed information NTG0660620

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: MK860_RS16755
• Genome accession: NZ_CP092829
• Coordinates: 3265278..3266453 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain MS32
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3260278..3271453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MK860_RS16725 (MK860_16660)	-	3260446..3260865 (-)	420	WP_034660147.1	TIGR03826 family flagellar region protein	-
MK860_RS16730 (MK860_16665)	comFC	3260922..3261608 (-)	687	WP_185847347.1	ComF family protein	Machinery gene
MK860_RS16735 (MK860_16670)	-	3261605..3261898 (-)	294	WP_278176766.1	late competence development ComFB family protein	-
MK860_RS16740 (MK860_16675)	comFA	3261965..3263344 (-)	1380	WP_278176769.1	DEAD/DEAH box helicase	Machinery gene
MK860_RS16745 (MK860_16680)	-	3263464..3264306 (-)	843	WP_113768803.1	DegV family protein	-
MK860_RS16750 (MK860_16685)	degU	3264524..3265213 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MK860_RS16755 (MK860_16690)	degS	3265278..3266453 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
MK860_RS16760 (MK860_16695)	-	3266675..3267343 (+)	669	WP_003212936.1	YigZ family protein	-
MK860_RS16765 (MK860_16700)	-	3267328..3268416 (+)	1089	WP_278176781.1	LCP family protein	-
MK860_RS16775 (MK860_16710)	-	3269741..3270808 (-)	1068	WP_003212692.1	MraY family glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=660620 MK860_RS16755 WP_003213166.1 3265278..3266453(-) (degS) [Bacillus pumilus strain MS32]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=660620 MK860_RS16755 WP_003213166.1 3265278..3266453(-) (degS) [Bacillus pumilus strain MS32]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AATTTTAACAAATTTAGCGAAGAAGAAATACGCGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAAAGAAGAGATGATCTAGAAAGACGATTGTTAAGCCTTCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCCCGTGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTAATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCACAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841