Detailed information NTG0660436

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG194_RS31135
• Genome accession: NZ_CP108427
• Coordinates: 6867100..6868386 (+)
• Length: 428 a.a.
• NCBI ID: WP_026151385.1
• Uniprot ID: A0ABU4FH97
• Organism: Streptomyces sp. NBC_01288
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6862100..6873386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG194_RS31105 (OG194_31085)	-	6863091..6863285 (+)	195	WP_026151384.1	hypothetical protein	-
OG194_RS31120 (OG194_31100)	tig	6863875..6865266 (+)	1392	WP_327404103.1	trigger factor	-
OG194_RS31125 (OG194_31105)	clpP	6865606..6866208 (+)	603	WP_327407260.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG194_RS31130 (OG194_31110)	clpP	6866259..6866939 (+)	681	WP_327404104.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG194_RS31135 (OG194_31115)	clpX	6867100..6868386 (+)	1287	WP_026151385.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG194_RS31140 (OG194_31120)	-	6868475..6869488 (-)	1014	WP_327404105.1	hypothetical protein	-
OG194_RS31145 (OG194_31125)	-	6869625..6872249 (+)	2625	WP_327404106.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46864.67 Da
• Isoelectric Point: 4.7838

>NTDB_id=660436 OG194_RS31135 WP_026151385.1 6867100..6868386(+) (clpX) [Streptomyces sp. NBC_01288]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGEHGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=660436 OG194_RS31135 WP_026151385.1 6867100..6868386(+) (clpX) [Streptomyces sp. NBC_01288]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTTGAGGGCTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGCACGGCGGCGGTCAGAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGTTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516