Detailed information NTG0658340

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG235_RS35705
• Genome accession: NZ_CP108298
• Coordinates: 8042815..8044101 (+)
• Length: 428 a.a.
• NCBI ID: WP_005479362.1
• Uniprot ID: A0A8I0P6X2
• Organism: Streptomyces sp. NBC_00024
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 8037815..8049101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG235_RS35675 (OG235_35635)	-	8038562..8038756 (+)	195	WP_033526477.1	hypothetical protein	-
OG235_RS35690 (OG235_35650)	tig	8039384..8040775 (+)	1392	WP_326582803.1	trigger factor	-
OG235_RS35695 (OG235_35655)	clpP	8041180..8041788 (+)	609	WP_189709844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG235_RS35700 (OG235_35660)	clpP	8041931..8042611 (+)	681	WP_326582804.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG235_RS35705 (OG235_35665)	clpX	8042815..8044101 (+)	1287	WP_005479362.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG235_RS35710 (OG235_35670)	-	8044267..8045217 (-)	951	WP_327729709.1	hypothetical protein	-
OG235_RS35715 (OG235_35675)	-	8045355..8047985 (+)	2631	WP_327729710.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.74 Da
• Isoelectric Point: 4.8317

>NTDB_id=658340 OG235_RS35705 WP_005479362.1 8042815..8044101(+) (clpX) [Streptomyces sp. NBC_00024]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIN
ADVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=658340 OG235_RS35705 WP_005479362.1 8042815..8044101(+) (clpX) [Streptomyces sp. NBC_00024]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGAAAGAGCGAGAACCCCTCGATCACGCGCGACGTGTCGGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGAGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAACTCGAATCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAAGCCCTCCTCCAGATCCTGATCGAGCCTCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCAAC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACCCTGATTCCGCGGGACGCCCGCGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A8I0P6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521