Detailed information NTG0065833

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R53_RS22350
• Genome accession: NZ_AP022087
• Coordinates: 4752837..4753862 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP4-S18-ESBL-07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4747837..4758862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R53_RS22330 (WP4S18E07_43120)	metJ	4749022..4749339 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R53_RS22335 (WP4S18E07_43130)	yiiX	4749399..4750007 (+)	609	WP_024045098.1	YiiX family permuted papain-like enzyme	-
H7R53_RS22340 (WP4S18E07_43140)	rpmE	4750068..4750280 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R53_RS22345 (WP4S18E07_43150)	priA	4750483..4752681 (+)	2199	WP_001366767.1	primosomal protein N'	Machinery gene
H7R53_RS22350 (WP4S18E07_43160)	cytR	4752837..4753862 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R53_RS22355 (WP4S18E07_43170)	ftsN	4753954..4754913 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R53_RS22360 (WP4S18E07_43180)	hslV	4755006..4755536 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R53_RS22365 (WP4S18E07_43190)	hslU	4755546..4756877 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
H7R53_RS22370 (WP4S18E07_43200)	menA	4756944..4757870 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R53_RS22375 (WP4S18E07_43210)	rraA	4757963..4758448 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R53_RS22380 (WP4S18E07_43220)	zapB	4758533..4758778 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=65833 H7R53_RS22350 WP_000644908.1 4752837..4753862(+) (cytR) [Escherichia coli strain WP4-S18-ESBL-07]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65833 H7R53_RS22350 WP_000644908.1 4752837..4753862(+) (cytR) [Escherichia coli strain WP4-S18-ESBL-07]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625