Detailed information NTG0657153

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG787_RS33180
• Genome accession: NZ_CP108243
• Coordinates: 7571629..7572915 (+)
• Length: 428 a.a.
• NCBI ID: WP_235479131.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00075
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7566629..7577915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG787_RS33145 (OG787_33040)	-	7566667..7567149 (+)	483	WP_405537668.1	HD domain-containing protein	-
OG787_RS33150 (OG787_33045)	-	7567355..7567549 (+)	195	WP_006383514.1	hypothetical protein	-
OG787_RS33165 (OG787_33060)	tig	7568095..7569489 (+)	1395	WP_369036221.1	trigger factor	-
OG787_RS33170 (OG787_33065)	clpP	7570067..7570684 (+)	618	WP_235480148.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG787_RS33175 (OG787_33070)	clpP	7570735..7571433 (+)	699	WP_235479130.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG787_RS33180 (OG787_33075)	clpX	7571629..7572915 (+)	1287	WP_235479131.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG787_RS33185 (OG787_33080)	-	7573001..7573960 (-)	960	WP_369036222.1	hypothetical protein	-
OG787_RS33190 (OG787_33085)	-	7574097..7576721 (+)	2625	WP_405537670.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46827.71 Da
• Isoelectric Point: 4.8780

>NTDB_id=657153 OG787_RS33180 WP_235479131.1 7571629..7572915(+) (clpX) [Streptomyces sp. NBC_00075]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREMENKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
KALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=657153 OG787_RS33180 WP_235479131.1 7571629..7572915(+) (clpX) [Streptomyces sp. NBC_00075]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTAGTCGGGCAGGAGTCG
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCGCAGA
CCCTGGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGTTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAAACCGGAATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCGTCGATCACGCGTGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATGGAGAACAAGGACCAGTTCGAGGCGGTCATGCCCG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTGATCACCTCGGTCCACAACCTGGACCGC
AAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGTCAGACCGGCGCACGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTGAACCCGACCCTGATCCCGAGGGACGCGCGAGGGCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.376	94.393	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523