Detailed information NTG0657009

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA64_RS16920
• Genome accession: NZ_CP108242
• Coordinates: 3726301..3727587 (-)
• Length: 428 a.a.
• NCBI ID: WP_356771100.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00076
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3721301..3732587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA64_RS16910 (OHA64_16845)	-	3722420..3725077 (-)	2658	WP_405613784.1	valine--tRNA ligase	-
OHA64_RS16915 (OHA64_16850)	-	3725214..3726227 (+)	1014	WP_405613786.1	hypothetical protein	-
OHA64_RS16920 (OHA64_16855)	clpX	3726301..3727587 (-)	1287	WP_356771100.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA64_RS16925 (OHA64_16860)	clpP	3727759..3728439 (-)	681	WP_405613788.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA64_RS16930 (OHA64_16865)	clpP	3728509..3729117 (-)	609	WP_405624001.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA64_RS16935 (OHA64_16870)	tig	3729442..3730854 (-)	1413	WP_405613790.1	trigger factor	-
OHA64_RS16950 (OHA64_16885)	-	3731564..3731758 (-)	195	WP_356771106.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46814.56 Da
• Isoelectric Point: 4.6966

>NTDB_id=657009 OHA64_RS16920 WP_356771100.1 3726301..3727587(-) (clpX) [Streptomyces sp. NBC_00076]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=657009 OHA64_RS16920 WP_356771100.1 3726301..3727587(-) (clpX) [Streptomyces sp. NBC_00076]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAGACCA
GTGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAACGGGTCCAGGCCGGTGAGAACGGCGGCGCCCAAGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCCCAGA
CTCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACCCGCGATGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGGCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCCGATGTCGTCCTCTCGAACGTCAACCCGACGCTGATCCCGCGGGATTCGCGCGGGCGGGGTCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521