Detailed information NTG0655583

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG565_RS23375
• Genome accession: NZ_CP108177
• Coordinates: 5443096..5444379 (+)
• Length: 427 a.a.
• NCBI ID: WP_328913555.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00138
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5438096..5449379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG565_RS23345 (OG565_23385)	-	5438766..5439218 (+)	453	WP_328913557.1	Lrp/AsnC family transcriptional regulator	-
OG565_RS23360 (OG565_23400)	tig	5439750..5441180 (+)	1431	WP_328913556.1	trigger factor	-
OG565_RS23365 (OG565_23405)	clpP	5441473..5442090 (+)	618	WP_328917810.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG565_RS23370 (OG565_23410)	clpP	5442185..5442880 (+)	696	WP_405785626.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG565_RS23375 (OG565_23415)	clpX	5443096..5444379 (+)	1284	WP_328913555.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG565_RS23380 (OG565_23420)	-	5444461..5445480 (-)	1020	WP_328913554.1	hypothetical protein	-
OG565_RS23385 (OG565_23425)	-	5445661..5448294 (+)	2634	WP_328913553.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46696.62 Da
• Isoelectric Point: 4.8710

>NTDB_id=655583 OG565_RS23375 WP_328913555.1 5443096..5444379(+) (clpX) [Streptomyces sp. NBC_00138]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEDLPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGESGRAGHDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDV
ENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELNLADQFSEIMPEDLVKFGMIPEFIGRLPVITSVHNLDRE
ALLQILLEPRNALVKQYQKLFELDGVELEFEHGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRQDVARVVITA
EVVHSNVNPTLVPREPRIVGKGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=655583 OG565_RS23375 WP_328913555.1 5443096..5444379(+) (clpX) [Streptomyces sp. NBC_00138]
GTGGCACGCATCGGTGACGGTGGAGACCTGCTGAAGTGCTCATTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTTGCCGAGTCCT
CCGAGGTGCGCTGGGAGGATCTGCCCAAGCCGCGGGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCC
GCGAAGAAGGCCCTGTCGGTGGCGGTCTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAGCGGCCGCGCGGGCCACGA
CGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACGCTGCTGGCCCAGACCC
TGGCCCGGATGCTCAATGTGCCCTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCCGGGTACGTCGGCGAGGACGTG
GAGAACATCCTCCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGA
GATCGACAAGGTCGCCCGCAAGAGCGAGAATCCGTCGATCACCCGTGATGTCTCGGGCGAGGGCGTGCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACCACGAATGTGCTGTTCATCGTGGGCGGCGCCTTCGCGGGTCTGGAGAAGATCATCGAGTCCAGGGCCGGCGCCAA
GGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGCGAGCTGAACCTGGCCGACCAGTTCTCCGAGATCATGCCGGAGG
ACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCAGCGTGCACAACCTGGACCGCGAG
GCGCTGCTGCAGATCCTGCTCGAACCGCGCAACGCGCTGGTGAAGCAGTATCAGAAGCTCTTCGAACTCGACGGTGTGGA
GCTGGAGTTCGAGCACGGCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACCGGCGCGCGCGGTCTGCGGG
CCATCATGGAGGAAGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCCAGGACGTGGCCCGCGTCGTCATCACCGCG
GAGGTCGTGCACTCCAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAAGGGCGAGCAGAAGAGCGC
CTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.591	93.911	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.097	96.487	0.532