Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   ANG_RS08690 Genome accession   NZ_AP013072
Coordinates   1731427..1732086 (+) Length   219 a.a.
NCBI ID   WP_003033966.1    Uniprot ID   I0SK93
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1726427..1737086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS08660 (ANG_1761) - 1726761..1727045 (-) 285 WP_003033862.1 DUF3165 family protein -
  ANG_RS08665 (ANG_1762) typA 1727110..1728951 (-) 1842 WP_003032385.1 translational GTPase TypA -
  ANG_RS08670 (ANG_1763) - 1729128..1729853 (+) 726 WP_020999492.1 pseudouridine synthase -
  ANG_RS08675 (ANG_1764) - 1729874..1730254 (-) 381 WP_020999491.1 rhodanese-like domain-containing protein -
  ANG_RS08680 (ANG_1765) - 1730248..1730472 (-) 225 WP_003025724.1 YqgQ family protein -
  ANG_RS08685 (ANG_1766) - 1730746..1731273 (-) 528 WP_003033883.1 Dps family protein -
  ANG_RS08690 (ANG_1767) cclA/cilC 1731427..1732086 (+) 660 WP_003033966.1 prepilin peptidase Machinery gene
  ANG_RS08695 trpB 1732258..1733393 (-) 1136 Protein_1720 tryptophan synthase subunit beta -
  ANG_RS08710 (ANG_1772) - 1735268..1735798 (-) 531 WP_003035190.1 VanZ family protein -
  ANG_RS08715 (ANG_1773) rlmN 1735791..1736873 (-) 1083 WP_025271931.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24815.14 Da        Isoelectric Point: 8.2951

>NTDB_id=65536 ANG_RS08690 WP_003033966.1 1731427..1732086(+) (cclA/cilC) [Streptococcus anginosus subsp. whileyi MAS624]
MIHFYFFLVGSIVASFLGLVVDRFPEQSIIGPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCQSKIPIRYLVLEIAIG
SLFLATSMGYLSIGQLVLLVMGITLSLYDQREQEYPLLIWLFFHFLLLFLTGFNLLMISFLTLGIVAFFFDLRIGAGDFL
FLASCSTVFKLTEILWLIQIASLVGLCLFCLKKRKDRIAFVPCLLIGVIVLLMYELLLQ

Nucleotide


Download         Length: 660 bp        

>NTDB_id=65536 ANG_RS08690 WP_003033966.1 1731427..1732086(+) (cclA/cilC) [Streptococcus anginosus subsp. whileyi MAS624]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTAGCTTCCTTTTTAGGGCTGGTCGTTGATCGTTTCCCTGAACA
GTCTATTATCGGTCCTTCCAGTCATTGTAATGCTTGTGGACAGAAATTAGCACCTCGCGATTTAGTCCCTGTCCTTTCTC
AGCTTATCAATCGACTGCGTTGTCGGTTTTGTCAGTCAAAAATTCCCATCCGCTATTTGGTATTAGAAATCGCTATCGGA
TCTCTCTTTCTTGCAACTTCTATGGGCTATCTAAGTATCGGTCAGCTTGTCCTACTTGTAATGGGCATAACCTTATCCCT
TTACGATCAAAGAGAACAAGAATATCCTCTGCTTATTTGGCTGTTTTTCCATTTCCTTCTTCTCTTTTTAACAGGTTTCA
ATCTTCTAATGATTAGTTTTTTAACCCTTGGAATAGTAGCTTTTTTCTTTGACTTACGAATTGGCGCAGGAGACTTTCTT
TTTCTAGCTTCTTGTTCAACTGTTTTCAAGTTGACAGAGATTCTTTGGCTGATTCAAATTGCCAGCTTAGTGGGCTTATG
TCTCTTTTGCTTAAAAAAGAGAAAAGACAGGATAGCTTTCGTTCCCTGTCTTTTGATTGGAGTGATTGTTCTACTTATGT
ATGAGTTGTTACTTCAATAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SK93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis NCTC 12261

57.339

99.543

0.571
  cclA/cilC Streptococcus mitis SK321

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae TIGR4

56.422

99.543

0.562
  cclA/cilC Streptococcus pneumoniae Rx1

55.963

99.543

0.557
  cclA/cilC Streptococcus pneumoniae D39

55.963

99.543

0.557
  cclA/cilC Streptococcus pneumoniae R6

55.963

99.543

0.557

Multiple sequence alignment