Detailed information NTG0654569

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT93_RS12955
• Genome accession: NZ_CP108130
• Coordinates: 2871776..2873068 (-)
• Length: 430 a.a.
• NCBI ID: WP_266476371.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00191
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2866776..2878068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT93_RS12945 (OHT93_12910)	-	2868005..2870626 (-)	2622	WP_406267897.1	valine--tRNA ligase	-
OHT93_RS12950 (OHT93_12915)	-	2870763..2871710 (+)	948	WP_406267900.1	hypothetical protein	-
OHT93_RS12955 (OHT93_12920)	clpX	2871776..2873068 (-)	1293	WP_266476371.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT93_RS12960 (OHT93_12925)	clpP	2873214..2873888 (-)	675	WP_323136031.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT93_RS12965 (OHT93_12930)	clpP	2873930..2874547 (-)	618	WP_266476368.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT93_RS12970 (OHT93_12935)	tig	2874777..2876174 (-)	1398	WP_406267904.1	trigger factor	-
OHT93_RS12985 (OHT93_12950)	-	2876794..2876988 (-)	195	WP_266476365.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47045.02 Da
• Isoelectric Point: 4.8824

>NTDB_id=654569 OHT93_RS12955 WP_266476371.1 2871776..2873068(-) (clpX) [Streptomyces sp. NBC_00191]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=654569 OHT93_RS12955 WP_266476371.1 2871776..2873068(-) (clpX) [Streptomyces sp. NBC_00191]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCGGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGGGGCACGGGCCG
GGACGACGCGATCGAACTGGCCAAGTCGAACATCCTCCTGCTGGGCCCCACCGGGTCCGGCAAGACTCTTCTCGCCCAGA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCTCGTAAGAGTGAAAACCCGTCGATCACCCGTGACGTGTCGGGCGAAGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCTCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTGAAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTGTTCGAACTGGACGGCGT
GGAGCTGGACTTCGACCTCCCGGCCCTGGAGGCGATCGCCGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTCGCACGGGTGGTCATCACG
GCGGACGTGGTGCGCAACAACGTGAACCCGACGCTGGTGCCGCGGGAGCCGCGGATCGTGAAGAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.641	95.814	0.514