Detailed information NTG0653847

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG965_RS15820
• Genome accession: NZ_CP108106
• Coordinates: 3531761..3533053 (-)
• Length: 430 a.a.
• NCBI ID: WP_371652718.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00224
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3526761..3538053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG965_RS15810 (OG965_15770)	-	3527985..3530609 (-)	2625	WP_371652716.1	valine--tRNA ligase	-
OG965_RS15815 (OG965_15775)	-	3530749..3531687 (+)	939	WP_371652717.1	hypothetical protein	-
OG965_RS15820 (OG965_15780)	clpX	3531761..3533053 (-)	1293	WP_371652718.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG965_RS15825 (OG965_15785)	clpP	3533210..3533887 (-)	678	WP_306822805.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG965_RS15830 (OG965_15790)	clpP	3533969..3534586 (-)	618	WP_361386536.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG965_RS15835 (OG965_15795)	tig	3534919..3536307 (-)	1389	WP_371652719.1	trigger factor	-
OG965_RS15850 (OG965_15810)	-	3536915..3537109 (-)	195	WP_101388310.1	hypothetical protein	-
OG965_RS15855 (OG965_15815)	-	3537238..3537675 (-)	438	WP_371652720.1	HD domain-containing protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47100.96 Da
• Isoelectric Point: 4.8809

>NTDB_id=653847 OG965_RS15820 WP_371652718.1 3531761..3533053(-) (clpX) [Streptomyces sp. NBC_00224]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=653847 OG965_RS15820 WP_371652718.1 3531761..3533053(-) (clpX) [Streptomyces sp. NBC_00224]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCGGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGGGCGCGCGGTCTGC
GCGCGATCATGGAGGAAGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTCGTCCACAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCATCGTGAAGAACGACGGGCGGCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512