Detailed information NTG0653544

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG764_RS23840
• Genome accession: NZ_CP108095
• Coordinates: 5412586..5413872 (+)
• Length: 428 a.a.
• NCBI ID: WP_328970461.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00239
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5407586..5418872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG764_RS23805 (OG764_23800)	-	5407974..5408423 (+)	450	WP_328970456.1	HD domain-containing protein	-
OG764_RS23810 (OG764_23805)	-	5408599..5408793 (+)	195	WP_328970457.1	hypothetical protein	-
OG764_RS23825 (OG764_23820)	tig	5409461..5410855 (+)	1395	WP_328970458.1	trigger factor	-
OG764_RS23830 (OG764_23825)	clpP	5411099..5411716 (+)	618	WP_328970459.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG764_RS23835 (OG764_23830)	clpP	5411764..5412432 (+)	669	WP_328970460.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG764_RS23840 (OG764_23835)	clpX	5412586..5413872 (+)	1287	WP_328970461.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG764_RS23845 (OG764_23840)	-	5414141..5415118 (-)	978	WP_328970462.1	hypothetical protein	-
OG764_RS23850 (OG764_23845)	-	5415249..5417870 (+)	2622	WP_328970463.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46869.75 Da
• Isoelectric Point: 4.8752

>NTDB_id=653544 OG764_RS23840 WP_328970461.1 5412586..5413872(+) (clpX) [Streptomyces sp. NBC_00239]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFHEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIS
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=653544 OG764_RS23840 WP_328970461.1 5412586..5413872(+) (clpX) [Streptomyces sp. NBC_00239]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACTT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCGGTAGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTCTCCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACGGCTTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTCGAGAGGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCACGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGGCGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCTCG
GCCGACGTGGTCCGCTCCAACGTGAACCCGACCCTCGTCCCCCGCATCGTCCCCAAGGACCAGGGCCCGCACGAGAAGTC
CGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516