Detailed information NTG0653464

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT59_RS30670
• Genome accession: NZ_CP108094
• Coordinates: 6889686..6890972 (+)
• Length: 428 a.a.
• NCBI ID: WP_326723115.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00243
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6884686..6895972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT59_RS30640 (OHT59_30650)	-	6885436..6885630 (+)	195	WP_266462266.1	hypothetical protein	-
OHT59_RS30655 (OHT59_30665)	tig	6886301..6887686 (+)	1386	WP_326723114.1	trigger factor	-
OHT59_RS30660 (OHT59_30670)	clpP	6888122..6888727 (+)	606	WP_186001018.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT59_RS30665 (OHT59_30675)	clpP	6888845..6889525 (+)	681	WP_266827428.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT59_RS30670 (OHT59_30680)	clpX	6889686..6890972 (+)	1287	WP_326723115.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT59_RS30675 (OHT59_30685)	-	6891062..6892039 (-)	978	WP_326723116.1	hypothetical protein	-
OHT59_RS30680 (OHT59_30690)	-	6892176..6894800 (+)	2625	WP_326723117.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46924.78 Da
• Isoelectric Point: 4.7866

>NTDB_id=653464 OHT59_RS30670 WP_326723115.1 6889686..6890972(+) (clpX) [Streptomyces sp. NBC_00243]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREIEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFESEALEAIADQAILRKTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
AEVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=653464 OHT59_RS30670 WP_326723115.1 6889686..6890972(+) (clpX) [Streptomyces sp. NBC_00243]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAAGAACTTCCCAAGCCTCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACAGCACGGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTCCTCGGCCCGACGGGCTCCGGCAAGACCCTTCTCGCGCAGA
CCCTGGCCCGCATGTTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGTGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGATCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCTCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGAGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCAAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGAGGTCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCGCGGGGACGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526