Detailed information NTG0653307

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG259_RS27330
• Genome accession: NZ_CP108088
• Coordinates: 6042140..6043423 (+)
• Length: 427 a.a.
• NCBI ID: WP_024755522.1
• Uniprot ID: A0ABW6XJ92
• Organism: Streptomyces sp. NBC_00250
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6037140..6048423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG259_RS27315 (OG259_27320)	tig	6039014..6040399 (+)	1386	WP_328944658.1	trigger factor	-
OG259_RS27320 (OG259_27325)	clpP	6040640..6041257 (+)	618	WP_266891887.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG259_RS27325 (OG259_27330)	clpP	6041321..6041983 (+)	663	WP_328944659.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG259_RS27330 (OG259_27335)	clpX	6042140..6043423 (+)	1284	WP_024755522.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG259_RS27335 (OG259_27340)	-	6043493..6044452 (-)	960	WP_328944660.1	hypothetical protein	-
OG259_RS27340 (OG259_27345)	-	6044591..6047218 (+)	2628	WP_328944661.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46672.50 Da
• Isoelectric Point: 4.8738

>NTDB_id=653307 OG259_RS27330 WP_024755522.1 6042140..6043423(+) (clpX) [Streptomyces sp. NBC_00250]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPRIVKNDGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=653307 OG259_RS27330 WP_024755522.1 6042140..6043423(+) (clpX) [Streptomyces sp. NBC_00250]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTAGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGGCGGGGCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATTCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTGGCCCAGA
CGCTGGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCCTCACCTCCGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGGAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAACTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGGATCGTGAAGAACGACGGCAGGCACGAGAAGTCGGC
CTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.528	96.253	0.515