Detailed information NTG0652849

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG860_RS26700
• Genome accession: NZ_CP108076
• Coordinates: 5981884..5983173 (+)
• Length: 429 a.a.
• NCBI ID: WP_020127826.1
• Uniprot ID: A0A6M4WMS1
• Organism: Streptomyces sp. NBC_00267
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5976884..5988173

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG860_RS26670 (OG860_26670)	-	5977487..5977707 (+)	221	Protein_5266	site-specific integrase	-
OG860_RS26685 (OG860_26685)	tig	5978291..5979676 (+)	1386	WP_328481862.1	trigger factor	-
OG860_RS26690 (OG860_26690)	clpP	5980106..5980714 (+)	609	WP_189709844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG860_RS26695 (OG860_26695)	clpP	5981022..5981702 (+)	681	WP_328481863.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG860_RS26700 (OG860_26700)	clpX	5981884..5983173 (+)	1290	WP_020127826.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG860_RS26705 (OG860_26705)	-	5983263..5984264 (-)	1002	WP_328481864.1	hypothetical protein	-
OG860_RS26710 (OG860_26710)	-	5984401..5987025 (+)	2625	WP_328481865.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46908.76 Da
• Isoelectric Point: 4.7788

>NTDB_id=652849 OG860_RS26700 WP_020127826.1 5981884..5983173(+) (clpX) [Streptomyces sp. NBC_00267]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIETRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=652849 OG860_RS26700 WP_020127826.1 5981884..5983173(+) (clpX) [Streptomyces sp. NBC_00267]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCCCTGTCGGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTCCTGGCGCAGA
CCCTGGCGCGCATGCTGAACGTCCCCTTCGCGATCGCCGACGCCACGGCCCTGACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCCATCACCCGCGACGTGTCGGGCGAGGGTGTGCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGACCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCCAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGACTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTCGTCCTCTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGCGGCGGTCGCGGCCCGGGCGAGCAGAA
GACGGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6M4WMS1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	95.804	0.522