Detailed information NTG0652275

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT57_RS18295
• Genome accession: NZ_CP108055
• Coordinates: 3955987..3957273 (-)
• Length: 428 a.a.
• NCBI ID: WP_328747496.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00285
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3950987..3962273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT57_RS18285 (OHT57_18300)	-	3952143..3954767 (-)	2625	WP_328747494.1	valine--tRNA ligase	-
OHT57_RS18290 (OHT57_18305)	-	3954904..3955911 (+)	1008	WP_328747495.1	hypothetical protein	-
OHT57_RS18295 (OHT57_18310)	clpX	3955987..3957273 (-)	1287	WP_328747496.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT57_RS18300 (OHT57_18315)	clpP	3957434..3958114 (-)	681	WP_328747497.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT57_RS18305 (OHT57_18320)	clpP	3958184..3958792 (-)	609	WP_328753236.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT57_RS18310 (OHT57_18325)	tig	3959133..3960527 (-)	1395	WP_328747498.1	trigger factor	-
OHT57_RS18325 (OHT57_18340)	-	3961177..3961482 (+)	306	WP_328747499.1	hypothetical protein	-
OHT57_RS18330 (OHT57_18345)	-	3961648..3961842 (-)	195	WP_328747500.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46766.56 Da
• Isoelectric Point: 4.8189

>NTDB_id=652275 OHT57_RS18295 WP_328747496.1 3955987..3957273(-) (clpX) [Streptomyces sp. NBC_00285]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKLELQSKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=652275 OHT57_RS18295 WP_328747496.1 3955987..3957273(-) (clpX) [Streptomyces sp. NBC_00285]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTCGTGGGCCAGGAATCG
GCCAAGAAGGCCCTCTCCGTGGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGTGGCGGCAGCAGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCGACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCCATCACGCGGGACGTGAGCGGCGAGGGCGTGCAGCAGGCAC
TGCTCAAGATCCTCGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCTCGAGCTGCAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGTCTCCCCGTCATCACCTCGGTGCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCAGACCAGGCCATCCTCCGCCAGACCGGTGCGCGAGGCCTGC
GCGCCATCATGGAAGAGGTCCTGCAGGGCGTCATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTCAACCCGACCCTCATCCCGCGGGACGCCCGCGGACGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521