Detailed information NTG0652025

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG985_RS30455
• Genome accession: NZ_CP108046
• Coordinates: 6713474..6714763 (+)
• Length: 429 a.a.
• NCBI ID: WP_371671548.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00289
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6708474..6719763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG985_RS30425 (OG985_30315)	-	6709219..6709413 (+)	195	WP_371671544.1	hypothetical protein	-
OG985_RS30440 (OG985_30330)	tig	6710156..6711559 (+)	1404	WP_371671545.1	trigger factor	-
OG985_RS30445 (OG985_30335)	clpP	6711929..6712549 (+)	621	WP_371671546.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG985_RS30450 (OG985_30340)	clpP	6712621..6713301 (+)	681	WP_371671547.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG985_RS30455 (OG985_30345)	clpX	6713474..6714763 (+)	1290	WP_371671548.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG985_RS30460 (OG985_30350)	-	6714827..6715768 (-)	942	WP_371671549.1	hypothetical protein	-
OG985_RS30465 (OG985_30355)	-	6715905..6718529 (+)	2625	WP_371671550.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46998.84 Da
• Isoelectric Point: 4.7809

>NTDB_id=652025 OG985_RS30455 WP_371671548.1 6713474..6714763(+) (clpX) [Streptomyces sp. NBC_00289]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDIMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALMKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=652025 OG985_RS30455 WP_371671548.1 6713474..6714763(+) (clpX) [Streptomyces sp. NBC_00289]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTCTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTGGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCGGCGCCCAGGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACACTCCTCGCCCAGA
CACTGGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACCGCGCTCACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCCCGGAAGAGCGAGAACCCCTCGATCACGCGTGACGTGAGCGGCGAGGGTGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGTCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGAGCGACGATCCGCTCCAAGCGGGAGCTCGAGGCCAAGGACCAGTTCGAGGACATCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGATGAAGCAGTACCAGCGTCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTGAACCCGACACTGATCCCGCGCGACGCGCGCAACGGGCGGGGTCCGGGCGAGCAGAA
GACCGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.988	95.804	0.527