Detailed information NTG0651940

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT51_RS27835
• Genome accession: NZ_CP108039
• Coordinates: 6252445..6253731 (+)
• Length: 428 a.a.
• NCBI ID: WP_328881650.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00299
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6247445..6258731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT51_RS27805 (OHT51_27855)	-	6247835..6248029 (+)	195	WP_030044846.1	hypothetical protein	-
OHT51_RS27820 (OHT51_27870)	tig	6249221..6250615 (+)	1395	WP_328881647.1	trigger factor	-
OHT51_RS27825 (OHT51_27875)	clpP	6250893..6251513 (+)	621	WP_328881648.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT51_RS27830 (OHT51_27880)	clpP	6251584..6252264 (+)	681	WP_328881649.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT51_RS27835 (OHT51_27885)	clpX	6252445..6253731 (+)	1287	WP_328881650.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT51_RS27840 (OHT51_27890)	-	6253808..6254791 (-)	984	WP_328881651.1	hypothetical protein	-
OHT51_RS27845 (OHT51_27895)	-	6254928..6257552 (+)	2625	WP_328881652.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46861.68 Da
• Isoelectric Point: 4.7847

>NTDB_id=651940 OHT51_RS27835 WP_328881650.1 6252445..6253731(+) (clpX) [Streptomyces sp. NBC_00299]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=651940 OHT51_RS27835 WP_328881650.1 6252445..6253731(+) (clpX) [Streptomyces sp. NBC_00299]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GTGAGGTCCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCA
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCGGACGCGACCGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAAGCCGAAACAGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCCTCGATCACGCGTGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGGGGCGCGTTCGCGGGCCTCGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGTGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTTCGCTCGAACGTGAACCCGACGCTCATTCCGCGGGATGCGCGGGGGCGGGGGTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523