Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG485_RS24390 Genome accession   NZ_CP108013
Coordinates   5562345..5563469 (-) Length   374 a.a.
NCBI ID   WP_328670696.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00328     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5557345..5568469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG485_RS24365 (OG485_24385) cseB 5558097..5558801 (-) 705 WP_328670692.1 two-component system response regulator CseB -
  OG485_RS24370 (OG485_24390) - 5558821..5559471 (-) 651 WP_328670693.1 hypothetical protein -
  OG485_RS24375 (OG485_24395) - 5559459..5559998 (-) 540 WP_328449706.1 SigE family RNA polymerase sigma factor -
  OG485_RS24380 (OG485_24400) - 5560253..5561170 (-) 918 WP_328670694.1 A/G-specific adenine glycosylase -
  OG485_RS24385 (OG485_24405) - 5561363..5562202 (+) 840 WP_328670695.1 hypothetical protein -
  OG485_RS24390 (OG485_24410) disA 5562345..5563469 (-) 1125 WP_328670696.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG485_RS24395 (OG485_24415) radA/sms 5563538..5564947 (-) 1410 WP_328670697.1 DNA repair protein RadA Machinery gene
  OG485_RS24400 (OG485_24420) - 5565293..5567095 (+) 1803 WP_328670698.1 hypothetical protein -
  OG485_RS24405 (OG485_24425) - 5567200..5568057 (-) 858 WP_328670699.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39983.75 Da        Isoelectric Point: 5.0022

>NTDB_id=651439 OG485_RS24390 WP_328670696.1 5562345..5563469(-) (disA) [Streptomyces sp. NBC_00328]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVGGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651439 OG485_RS24390 WP_328670696.1 5562345..5563469(-) (disA) [Streptomyces sp. NBC_00328]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGCGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCCCTGCGCGACGGGCTGGAACGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCCATGTGCACGGGTGGATTCGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGT
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAAATCCTTCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACGATCCCCACGGAGGAGACGGGCACGCGACACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTGTCGGTCTCCCAGTCGATGCGTCTGATCGCCCTGTACGTCGGCGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGTCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTCGTCACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAACTGGGCACGGACGGGCGGCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTGGCCAAGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCTCCGCGCGGGTTCCGTCTCCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGTCTCGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438