Detailed information NTG0651439

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: L4F93_RS05665
• Genome accession: NZ_CP091456
• Coordinates: 1191323..1192450 (-)
• Length: 375 a.a.
• NCBI ID: WP_250351504.1
• Uniprot ID: -
• Organism: Avibacterium sp. 20-132
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1186323..1197450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L4F93_RS05650 (L4F93_05650)	glpQ	1187723..1188820 (+)	1098	WP_250351501.1	glycerophosphodiester phosphodiesterase	-
L4F93_RS05655 (L4F93_05655)	ftsY	1188897..1190531 (-)	1635	WP_250351502.1	signal recognition particle-docking protein FtsY	-
L4F93_RS05660 (L4F93_05660)	rsmD	1190704..1191315 (+)	612	WP_250351503.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
L4F93_RS05665 (L4F93_05665)	dprA	1191323..1192450 (-)	1128	WP_250351504.1	DNA-processing protein DprA	Machinery gene
L4F93_RS05670 (L4F93_05670)	-	1192610..1192912 (-)	303	WP_326938207.1	DUF305 domain-containing protein	-
L4F93_RS05675 (L4F93_05675)	-	1193404..1195431 (+)	2028	WP_250351506.1	BCCT family transporter	-
L4F93_RS05680 (L4F93_05680)	-	1195542..1197326 (+)	1785	WP_250351507.1	sodium:proton antiporter	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41434.30 Da
• Isoelectric Point: 5.9076

>NTDB_id=651439 L4F93_RS05665 WP_250351504.1 1191323..1192450(-) (dprA) [Avibacterium sp. 20-132]
MLNNEIVLRLLQIPKLGANSIQKILADIPPEQLLDYDAIAFKQIGWTEKQIQRWFYPERKFIDPALDWAQSAGNVLLNFT
EQHYPYLLKQIPSAPPLLFLQGNMTALSQPQIAIVGSRYCSNYGEYWAKFFAQELNQAGFVITSGLALGIDGFCHHAVVA
QKGQTVAVLGSGLNAIYPAKHRGLAQQILENNGALVSEFLPNQPPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGHIQNGFSEGCHKLIKQGATLVENVQDILDNLPNYGDNASRYAVAKQQDLPLNLNGSPKNSATQPNE
PPSYPELYAQLSHIAISLDELSARLSLPIDELLTQLLSLELQGLVVSENGLYRRG

Nucleotide

• Length: 1128 bp

>NTDB_id=651439 L4F93_RS05665 WP_250351504.1 1191323..1192450(-) (dprA) [Avibacterium sp. 20-132]
ATGTTAAACAACGAAATCGTACTCCGCTTATTACAAATCCCCAAACTTGGCGCTAATAGCATTCAAAAAATATTGGCTGA
CATTCCGCCTGAACAGCTTTTAGACTATGACGCGATCGCGTTCAAACAAATCGGTTGGACAGAAAAACAAATTCAGCGTT
GGTTTTATCCTGAGCGTAAATTTATCGATCCGGCATTAGATTGGGCGCAAAGTGCGGGCAATGTTTTACTGAATTTTACC
GAGCAACATTATCCTTATTTGCTGAAACAAATTCCTTCTGCTCCACCGCTTTTATTTTTGCAAGGGAATATGACCGCACT
TTCACAACCACAAATTGCCATTGTTGGTAGCCGTTATTGCTCAAATTATGGGGAATATTGGGCGAAGTTTTTCGCGCAAG
AATTAAACCAAGCGGGTTTTGTCATTACCAGTGGTTTAGCATTAGGGATTGATGGCTTTTGTCATCACGCGGTGGTGGCA
CAGAAAGGGCAAACCGTTGCAGTATTAGGCAGTGGGTTAAATGCTATTTATCCTGCTAAACATCGTGGCTTAGCTCAGCA
AATTCTTGAAAATAATGGTGCATTGGTTTCTGAATTTTTGCCCAACCAGCCTCCGGTAGCAGAAAATTTCCCTCGTCGAA
ACCGTATTATCAGTGGGCTTTCTCTTGGTACATTAATCATCGAAGCAACAGAACGCAGTGGTTCACTGATTACCGCTCGC
TACGCCCTTGAGCAAAATCGAGAAATCTTTGCGCTCCCCGGCCATATTCAAAATGGGTTCAGCGAAGGCTGTCATAAATT
AATTAAACAAGGCGCAACACTGGTGGAAAACGTGCAGGACATTCTAGACAATCTGCCAAATTATGGCGATAACGCCTCAC
GTTATGCGGTGGCAAAACAACAAGATCTTCCACTTAATTTAAACGGCTCGCCAAAAAACTCCGCCACACAGCCAAATGAG
CCACCAAGTTACCCTGAACTTTACGCCCAACTTAGCCATATTGCCATCAGCCTTGATGAGCTTTCCGCACGGTTATCCTT
ACCTATTGATGAATTGCTCACCCAACTATTAAGTTTAGAACTGCAAGGTTTAGTGGTCAGTGAAAATGGATTATATCGAA
GGGGTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

• DprA winged helix domain (DprA_WH) (314-370)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.141	98.133	0.6
dprA	Glaesserella parasuis strain SC1401	52.66	100	0.528
dprA	Vibrio cholerae strain A1552	45.38	98.133	0.445
dprA	Vibrio campbellii strain DS40M4	45.109	98.133	0.443
dprA	Legionella pneumophila strain ERS1305867	37.337	100	0.381