Detailed information NTG0651024

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA62_RS30160
• Genome accession: NZ_CP107998
• Coordinates: 6743884..6745170 (+)
• Length: 428 a.a.
• NCBI ID: WP_328683355.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00343
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6738884..6750170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA62_RS30130 (OHA62_30105)	-	6739898..6740092 (+)	195	WP_328683352.1	hypothetical protein	-
OHA62_RS30145 (OHA62_30120)	tig	6740681..6742048 (+)	1368	WP_328683353.1	trigger factor	-
OHA62_RS30150 (OHA62_30125)	clpP	6742391..6742993 (+)	603	WP_327407260.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA62_RS30155 (OHA62_30130)	clpP	6743044..6743724 (+)	681	WP_328683354.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA62_RS30160 (OHA62_30135)	clpX	6743884..6745170 (+)	1287	WP_328683355.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA62_RS30165 (OHA62_30140)	-	6745249..6746256 (-)	1008	WP_328683356.1	hypothetical protein	-
OHA62_RS30170 (OHA62_30145)	-	6746393..6749017 (+)	2625	WP_328683357.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46891.69 Da
• Isoelectric Point: 4.7838

>NTDB_id=651024 OHA62_RS30160 WP_328683355.1 6743884..6745170(+) (clpX) [Streptomyces sp. NBC_00343]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGEHGGGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=651024 OHA62_RS30160 WP_328683355.1 6743884..6745170(+) (clpX) [Streptomyces sp. NBC_00343]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTGGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTTGAGGGGTACGTCGTAGGCCAGGAGTCG
GCCAAGAAGGCTCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGCACGGCGGCGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCACAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGGCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACT
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGGGGCCGAGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516