Detailed information NTG0650406

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHS57_RS12660
• Genome accession: NZ_CP107968
• Coordinates: 2869433..2870725 (-)
• Length: 430 a.a.
• NCBI ID: WP_041989752.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00370
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2864433..2875725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS57_RS12650 (OHS57_12670)	-	2865590..2868211 (-)	2622	WP_328581973.1	valine--tRNA ligase	-
OHS57_RS12655 (OHS57_12675)	-	2868348..2869352 (+)	1005	WP_041989755.1	hypothetical protein	-
OHS57_RS12660 (OHS57_12680)	clpX	2869433..2870725 (-)	1293	WP_041989752.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS57_RS12665 (OHS57_12685)	clpP	2870894..2871568 (-)	675	WP_041989749.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS57_RS12670 (OHS57_12690)	clpP	2871633..2872238 (-)	606	WP_031231653.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS57_RS12675 (OHS57_12695)	tig	2872589..2874001 (-)	1413	WP_328581974.1	trigger factor	-
OHS57_RS12690 (OHS57_12710)	-	2874599..2874793 (-)	195	WP_041989743.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47205.01 Da
• Isoelectric Point: 4.8907

>NTDB_id=650406 OHS57_RS12660 WP_041989752.1 2869433..2870725(-) (clpX) [Streptomyces sp. NBC_00370]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELEFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
EDVVHSHVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=650406 OHS57_RS12660 WP_041989752.1 2869433..2870725(-) (clpX) [Streptomyces sp. NBC_00370]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTGGCCGAGACCT
CCGAGGTGCGCTGGGAGGAACTGCCCAAGCCCCGGGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCGGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCGCCAACCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCCATCGCGGACGCCACGGCGCTGACCGAGGCCGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCGGGCGAGGGTGTGCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTACCGCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTTGAGCGGATCATCGAGTCACGGGCCGGCGC
GAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGAGTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGGCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTGGTCATCACG
GAAGACGTGGTCCACTCGCATGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCAAGAACGACGGCCGGCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509