Detailed information NTG0649740

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHS81_RS24635
• Genome accession: NZ_CP107940
• Coordinates: 5641453..5642736 (+)
• Length: 427 a.a.
• NCBI ID: WP_328386842.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00400
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5636453..5647736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS81_RS24600 (OHS81_24620)	-	5636941..5637135 (+)	195	WP_030082107.1	hypothetical protein	-
OHS81_RS24605 (OHS81_24625)	-	5637188..5637574 (-)	387	WP_328386840.1	arsenate reductase family protein	-
OHS81_RS24620 (OHS81_24640)	tig	5638252..5639640 (+)	1389	WP_328386841.1	trigger factor	-
OHS81_RS24625 (OHS81_24645)	clpP	5639938..5640540 (+)	603	WP_030283915.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS81_RS24630 (OHS81_24650)	clpP	5640606..5641283 (+)	678	WP_328391389.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS81_RS24635 (OHS81_24655)	clpX	5641453..5642736 (+)	1284	WP_328386842.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS81_RS24640 (OHS81_24660)	-	5642842..5643795 (-)	954	WP_328386843.1	hypothetical protein	-
OHS81_RS24645 (OHS81_24665)	-	5643946..5646594 (+)	2649	WP_328386844.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46744.58 Da
• Isoelectric Point: 4.8305

>NTDB_id=649740 OHS81_RS24635 WP_328386842.1 5641453..5642736(+) (clpX) [Streptomyces sp. NBC_00400]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQEP
AKKALSVAVYNHYKRVQAGENGPGRGEEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIEARSGAKGIGFGATIRSKREIESKDQLQDVMPEDMVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYKRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQAVMYEIPSRKDVARVVITE
DVVHSNVNPTLVPRNRGESGEPQEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=649740 OHS81_RS24635 WP_328386842.1 5641453..5642736(+) (clpX) [Streptomyces sp. NBC_00400]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCATTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGGGAGATCTACGAGTTCCTGAACGGCTATGTCGTCGGCCAGGAGCCC
GCGAAGAAGGCGCTGTCGGTCGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCCCCGGCCGCGGCGA
GGAGGGCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACCCTGCTCGCGCAGACCC
TCGCCCGGATGCTGAACGTCCCCTTCGCGTTCGCCGACGCCACGGCGCTCACGGAGGCCGGCTACGTCGGCGAGGACGTC
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAATTCATCCAGATC
GACACCACCAACGTGCTCTTCATCGTCGGCGGTGCCTTCGCCGGCCTGGAGAAGATCATCGAGGCCCGGTCCGGCGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCCAAGGACCAGCTCCAGGACGTCATGCCGGAGG
ACATGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCCTCACCTCGGTCCACAACCTCGACCGCGAG
GCCCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACAAGCGCCTCTTCGAACTCGACGGTGTCGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCGGCACCGGCGCCCGCGGTCTGCGCG
CCATCATGGAGGAAGTCCTCCAGGCGGTGATGTACGAAATCCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACCGAG
GACGTCGTGCACTCGAATGTGAACCCGACCCTGGTGCCGCGCAACCGCGGCGAGTCGGGGGAGCCGCAGGAGAAGAGCGC
GTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.344	93.911	0.585
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.683	96.019	0.506