Detailed information NTG0649659

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHS59_RS29485
• Genome accession: NZ_CP107935
• Coordinates: 6772667..6773953 (+)
• Length: 428 a.a.
• NCBI ID: WP_189777442.1
• Uniprot ID: A0ABZ1JJL4
• Organism: Streptomyces sp. NBC_00414
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6767667..6778953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS59_RS29455 (OHS59_29460)	-	6767723..6768562 (+)	840	WP_328496372.1	alpha/beta hydrolase	-
OHS59_RS29470 (OHS59_29475)	tig	6769178..6770593 (+)	1416	WP_328496373.1	trigger factor	-
OHS59_RS29475 (OHS59_29480)	clpP	6771126..6771731 (+)	606	WP_328499411.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS59_RS29480 (OHS59_29485)	clpP	6771828..6772505 (+)	678	WP_328496374.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS59_RS29485 (OHS59_29490)	clpX	6772667..6773953 (+)	1287	WP_189777442.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS59_RS29490 (OHS59_29495)	-	6774031..6774972 (-)	942	WP_328496375.1	hypothetical protein	-
OHS59_RS29495 (OHS59_29500)	-	6775108..6777738 (+)	2631	WP_328496376.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46955.78 Da
• Isoelectric Point: 4.8402

>NTDB_id=649659 OHS59_RS29485 WP_189777442.1 6772667..6773953(+) (clpX) [Streptomyces sp. NBC_00414]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLVESRAGAKGIGFGATIRSKKELEAKDRFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
SEVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=649659 OHS59_RS29485 WP_189777442.1 6772667..6773953(+) (clpX) [Streptomyces sp. NBC_00414]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAAACGA
GCGAGGTGCGATGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAATTCCTCGAGGGGTACGTCGTAGGCCAGGAGTCC
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACAGCGCGGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTGCTGGCGCAGA
CACTGGCCCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGTAAGAGCGAGAACCCGTCGATCACGCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCTC
TGCTCAAGATCCTGGAGGGCACCACGGCCTCCGTGCCTCCGCAGGGCGGGCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCGTCGAGTCCCGTGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGAAGGAACTTGAGGCGAAGGACCGCTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GAGGCACTCCTCCAGATCCTGGTGGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTGGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTTGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
TCGGAGGTCGTCCGCTCGAACGTGAACCCGACCCTCATCCCGCGCGACGCGCGGGGCCGGGGCCCGGGGGAGCAGAAGAC
CGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.988	96.028	0.528