Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SCAZ3_RS02630 | Genome accession | NZ_AIDX01000001 |
| Coordinates | 576103..576594 (-) | Length | 163 a.a. |
| NCBI ID | WP_003045179.1 | Uniprot ID | - |
| Organism | Streptococcus canis FSL Z3-227 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 571103..581594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCAZ3_RS02615 (SCAZ3_09630) | - | 573559..574503 (+) | 945 | WP_003045175.1 | magnesium transporter CorA family protein | - |
| SCAZ3_RS02620 (SCAZ3_09635) | - | 574615..575274 (+) | 660 | WP_003045177.1 | DUF1129 domain-containing protein | - |
| SCAZ3_RS02625 (SCAZ3_09640) | rpsR | 575745..575984 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| SCAZ3_RS02630 (SCAZ3_09645) | ssb | 576103..576594 (-) | 492 | WP_003045179.1 | single-stranded DNA-binding protein | Machinery gene |
| SCAZ3_RS02635 (SCAZ3_09650) | rpsF | 576616..576906 (-) | 291 | WP_003045181.1 | 30S ribosomal protein S6 | - |
| SCAZ3_RS12445 (SCAZ3_09655) | - | 577946..578239 (-) | 294 | WP_003045183.1 | hypothetical protein | - |
| SCAZ3_RS02645 (SCAZ3_09660) | mutY | 578409..579572 (+) | 1164 | WP_003045185.1 | A/G-specific adenine glycosylase | - |
| SCAZ3_RS02650 (SCAZ3_09665) | trxA | 579670..579984 (-) | 315 | WP_003045187.1 | thioredoxin | - |
| SCAZ3_RS02655 (SCAZ3_09670) | - | 580211..581530 (+) | 1320 | WP_003045190.1 | FAD-containing oxidoreductase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17961.77 Da Isoelectric Point: 4.8894
>NTDB_id=64765 SCAZ3_RS02630 WP_003045179.1 576103..576594(-) (ssb) [Streptococcus canis FSL Z3-227]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRNFKSQNGEREADFISCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNAPSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRNFKSQNGEREADFISCVIWRQPAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNAPSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=64765 SCAZ3_RS02630 WP_003045179.1 576103..576594(-) (ssb) [Streptococcus canis FSL Z3-227]
ATGATTAACAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACGCCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTAACTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAGCTGTGTTATCT
GGCGTCAGCCAGCTGAAAACTTAGCAAACTGGGCTAAAAAAGGTGCCTTAATCGGAATTACAGGTCGTATTCAGACCCGT
AATTACGAAAACCAACAAGGGCAACGTGTCTATGTGACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGATCATTTAATGGTGGTTTTAACAACAATGCCCCATCATCAAACAGTTACTCAGCAC
CTGCACAACAAACACCTAACTTTGGAAGAGATGACAGTCCATTTGGTAATTCAAACCCGATGGATATTTCAGATGACGAT
CTTCCATTCTAG
ATGATTAACAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACGCCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTAACTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAGCTGTGTTATCT
GGCGTCAGCCAGCTGAAAACTTAGCAAACTGGGCTAAAAAAGGTGCCTTAATCGGAATTACAGGTCGTATTCAGACCCGT
AATTACGAAAACCAACAAGGGCAACGTGTCTATGTGACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGATCATTTAATGGTGGTTTTAACAACAATGCCCCATCATCAAACAGTTACTCAGCAC
CTGCACAACAAACACCTAACTTTGGAAGAGATGACAGTCCATTTGGTAATTCAAACCCGATGGATATTTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.14 |
100 |
0.614 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.471 |
100 |
0.613 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.66 |
65.031 |
0.362 |
| ssb | Vibrio cholerae strain A1552 |
33.333 |
100 |
0.362 |