Detailed information NTG0647538

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: K9U01_RS16155
• Genome accession: NZ_CP091078
• Coordinates: 3758290..3759684 (+)
• Length: 464 a.a.
• NCBI ID: WP_051634076.1
• Uniprot ID: A0AAP4NHR5
• Organism: Xanthomonas arboricola pv. pruni strain R1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3753290..3764684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9U01_RS16140 (K9U01_16140)	sucD	3754183..3755058 (-)	876	WP_011038208.1	succinate--CoA ligase subunit alpha	-
K9U01_RS16145 (K9U01_16145)	sucC	3755083..3756252 (-)	1170	WP_016901264.1	ADP-forming succinate--CoA ligase subunit beta	-
K9U01_RS16150 (K9U01_16150)	-	3756484..3758097 (+)	1614	WP_039512337.1	HAMP domain-containing sensor histidine kinase	-
K9U01_RS16155 (K9U01_16155)	pilR	3758290..3759684 (+)	1395	WP_051634076.1	sigma-54 dependent transcriptional regulator	Regulator
K9U01_RS16160 (K9U01_16160)	pilB	3759920..3761653 (-)	1734	WP_039512338.1	type IV-A pilus assembly ATPase PilB	Machinery gene
K9U01_RS16165 (K9U01_16165)	-	3761838..3762242 (-)	405	WP_043088084.1	pilin	-
K9U01_RS16170 (K9U01_16170)	pilC	3762620..3763879 (+)	1260	WP_043088082.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50118.51 Da
• Isoelectric Point: 6.5112

>NTDB_id=647538 K9U01_RS16155 WP_051634076.1 3758290..3759684(+) (pilR) [Xanthomonas arboricola pv. pruni strain R1]
MNEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPDGNGIELVTEIAKHYPQTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNRDRPAPPAPPPEQASRLLGDSGAMEGLRATIGKVAR
SQAPVYIVGESGVGKELVARTIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASSESLVDVRILSATHKNLGDLVSDGRFRHDLYYRINVIELRVPPLRERGGDLP
QLAAAIIARLAHSHGRPIPLLTQSALDALDQYGFPGNVRELENILERALALAEDDQISATDLRLPAHGGHRLAATPGSAA
VEPREAVVDIDPASAALPSYIEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1395 bp

>NTDB_id=647538 K9U01_RS16155 WP_051634076.1 3758290..3759684(+) (pilR) [Xanthomonas arboricola pv. pruni strain R1]
ATGAACGAACCGAAAAGTGCCCTGGTTGTCGATGACGAGCGTGACATTCGCGAACTGCTTGTTCTCACCCTGGGCCGGAT
GGGCCTGCGCATCAGCACCGCCGCCAACCTGGCCGAAGCGCGCGAGCTGCTGGCCAACAATCCCTACGACCTGTGCCTGA
CCGACATGCGGTTGCCCGACGGCAACGGCATCGAGCTGGTCACCGAAATCGCCAAGCACTATCCGCAGACCCCGGTGGCG
ATGATCACCGCGTTCGGCAGCATGGACCTGGCGGTGGAAGCCTTGAAGGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCAGCGTGCTGCGCGGCCTGGTCAAGCACGCGCTGGAATTGAACAACCGCGACCGCCCCGCCCCGCCCGCGCCGC
CGCCGGAACAGGCCAGCCGCCTGCTCGGCGACTCCGGCGCGATGGAAGGCCTGCGCGCCACCATCGGCAAGGTCGCGCGC
AGCCAGGCGCCGGTCTACATCGTCGGCGAATCGGGCGTGGGCAAGGAGCTGGTCGCCCGCACCATCCACGAGCAAGGCGC
ACGCGCGGCCGGTCCATTTGTGCCGGTCAACTGCGGCGCCATCCCCGCCGAACTGATGGAAAGCGAATTCTTCGGCCACA
AGAAGGGCAGTTTCACCGGCGCGCATGCCGACAAGCCCGGCCTGTTCCAGGCCGCGCATGGCGGCACGCTGTTTCTGGAC
GAGGTGGCCGAATTGCCGCTGCAGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCCCGGTGGGCGC
TTCCAGCGAGTCGCTGGTGGACGTGCGCATTCTCTCGGCCACCCACAAAAACCTGGGCGACCTGGTCTCCGACGGCCGTT
TCCGCCACGACCTGTACTACCGCATCAACGTCATCGAACTGCGCGTGCCGCCGCTGCGCGAACGCGGCGGCGACCTGCCG
CAACTGGCCGCGGCCATCATCGCGCGCCTGGCGCATAGCCACGGCCGGCCGATTCCGCTGCTGACCCAGTCCGCGCTCGA
CGCGCTGGACCAGTACGGCTTCCCGGGCAATGTGCGCGAGCTGGAAAATATCCTCGAACGCGCCCTGGCCCTGGCCGAAG
ACGACCAGATCAGCGCCACCGACCTGCGCCTGCCCGCCCACGGCGGCCATCGCCTGGCCGCCACACCCGGCAGCGCCGCC
GTCGAACCCCGCGAAGCAGTGGTCGACATCGACCCCGCCTCGGCCGCCCTGCCTTCCTACATCGAGCAACTGGAACGCGC
CGCGATCCAGAAGGCGCTGGAAGAAAACCGCTGGAACAAGACCAAGACCGCCGCGCAGCTGGGCATCACGTTTCGGGCGT
TGCGTTACAAGTTGAAGAAGTTGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (142-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.261	99.138	0.627
pilR	Acinetobacter baumannii strain A118	48.922	100	0.489