Detailed information NTG0647538

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG381_RS17845
• Genome accession: NZ_CP107869
• Coordinates: 3950807..3952096 (-)
• Length: 429 a.a.
• NCBI ID: WP_307030666.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00490
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3945807..3957096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG381_RS17835 (OG381_17845)	-	3946312..3948936 (-)	2625	WP_327717082.1	valine--tRNA ligase	-
OG381_RS17840 (OG381_17850)	-	3949793..3950734 (+)	942	WP_327717083.1	hypothetical protein	-
OG381_RS17845 (OG381_17855)	clpX	3950807..3952096 (-)	1290	WP_307030666.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG381_RS17850 (OG381_17860)	clpP	3952275..3952955 (-)	681	WP_327717084.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG381_RS17855 (OG381_17865)	clpP	3953008..3953613 (-)	606	WP_327722488.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG381_RS17860 (OG381_17870)	tig	3953971..3955371 (-)	1401	WP_327717085.1	trigger factor	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46862.61 Da
• Isoelectric Point: 4.7809

>NTDB_id=647538 OG381_RS17845 WP_307030666.1 3950807..3952096(-) (clpX) [Streptomyces sp. NBC_00490]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEQ
AKKALSVAVYNHYKRVQAGENGGGSGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEAKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=647538 OG381_RS17845 WP_307030666.1 3950807..3952096(-) (clpX) [Streptomyces sp. NBC_00490]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCTCGTGAGATCTACGAGTTCCTCGAGGGCTATGTGGTGGGCCAGGAGCAG
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGAAGCGGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCAACGGCGCTCACGGAGGCGGGGTACGTCGGCGAGGAT
GTCGAGAACATCCTTCTGAAGCTCATTCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCGATCACCCGGGATGTGAGCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCTTGGAGAAGCTCATCGAGTCCCGCGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGACGTCGTCCACTCCAACGTCAACCCCACCCTCATCCCCCGCGACGCCCGCAACGGCCGGGGCCCGGGAGAGGCGAA
GACGGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	95.804	0.522