Detailed information NTG0647454

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: L1O91_RS08895
• Genome accession: NZ_CP091066
• Coordinates: 1856699..1857169 (-)
• Length: 156 a.a.
• NCBI ID: WP_000934770.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UMCG579
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1851699..1862169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1O91_RS08840 (L1O91_08840)	-	1851840..1852046 (-)	207	WP_000195820.1	DUF1381 domain-containing protein	-
L1O91_RS08845 (L1O91_08845)	-	1852083..1852619 (-)	537	WP_001066444.1	dUTPase	-
L1O91_RS08850 (L1O91_08850)	-	1852975..1853100 (-)	126	Protein_1740	DUF1024 family protein	-
L1O91_RS08855 (L1O91_08855)	-	1853093..1853503 (-)	411	WP_000197968.1	hypothetical protein	-
L1O91_RS08860 (L1O91_08860)	-	1853500..1854009 (-)	510	WP_001105598.1	hypothetical protein	-
L1O91_RS08865 (L1O91_08865)	-	1854006..1854455 (-)	450	WP_000982711.1	YopX family protein	-
L1O91_RS08870 (L1O91_08870)	-	1854520..1854762 (-)	243	WP_000131366.1	SAV1978 family virulence-associated passenger protein	-
L1O91_RS08875 (L1O91_08875)	-	1854766..1855134 (-)	369	WP_000101274.1	SA1788 family PVL leukocidin-associated protein	-
L1O91_RS08880 (L1O91_08880)	-	1855147..1855551 (-)	405	WP_000401964.1	RusA family crossover junction endodeoxyribonuclease	-
L1O91_RS08885 (L1O91_08885)	-	1855560..1855778 (-)	219	WP_000338528.1	hypothetical protein	-
L1O91_RS08890 (L1O91_08890)	-	1855785..1856669 (-)	885	WP_000148301.1	DnaD domain protein	-
L1O91_RS08895 (L1O91_08895)	ssbA	1856699..1857169 (-)	471	WP_000934770.1	single-stranded DNA-binding protein	Machinery gene
L1O91_RS08900 (L1O91_08900)	-	1857170..1857787 (-)	618	WP_071621397.1	MBL fold metallo-hydrolase	-
L1O91_RS08905 (L1O91_08905)	-	1857868..1858788 (-)	921	WP_031764964.1	recombinase RecT	-
L1O91_RS08910 (L1O91_08910)	-	1858790..1860733 (-)	1944	WP_000700562.1	AAA family ATPase	-
L1O91_RS08915 (L1O91_08915)	-	1860742..1861005 (-)	264	WP_001205732.1	hypothetical protein	-
L1O91_RS08920 (L1O91_08920)	-	1861014..1861274 (-)	261	WP_000291489.1	DUF1108 family protein	-
L1O91_RS08925 (L1O91_08925)	-	1861367..1861528 (-)	162	WP_000066020.1	DUF1270 domain-containing protein	-
L1O91_RS08930 (L1O91_08930)	-	1861525..1861845 (-)	321	WP_001120197.1	DUF771 domain-containing protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17713.63 Da
• Isoelectric Point: 5.2672

>NTDB_id=647454 L1O91_RS08895 WP_000934770.1 1856699..1857169(-) (ssbA) [Staphylococcus aureus strain UMCG579]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=647454 L1O91_RS08895 WP_000934770.1 1856699..1857169(-) (ssbA) [Staphylococcus aureus strain UMCG579]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.367	100	0.628
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.203	100	0.365