Detailed information
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | L1A16_RS09570 | Genome accession | NZ_CP090885 |
| Coordinates | 1858572..1858985 (-) | Length | 137 a.a. |
| NCBI ID | WP_000265624.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain ND6401 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1853572..1863985
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1A16_RS09545 (L1A16_09545) | - | 1854267..1855091 (-) | 825 | WP_001809383.1 | membrane protein insertase YidC | - |
| L1A16_RS09550 (L1A16_09550) | rnpA | 1855066..1855437 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| L1A16_RS10740 | - | 1855454..1855585 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| L1A16_RS09555 (L1A16_09555) | - | 1855586..1856776 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| L1A16_RS09560 (L1A16_09560) | comYH | 1856827..1857780 (-) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| L1A16_RS09565 (L1A16_09565) | - | 1857841..1858435 (-) | 595 | Protein_1878 | methyltransferase domain-containing protein | - |
| L1A16_RS09570 (L1A16_09570) | comGG/cglG | 1858572..1858985 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| L1A16_RS09575 (L1A16_09575) | comGF/cglF | 1858963..1859424 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| L1A16_RS09580 (L1A16_09580) | comGE/cglE | 1859387..1859689 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| L1A16_RS09585 (L1A16_09585) | comGD/cglD | 1859652..1860056 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| L1A16_RS09590 (L1A16_09590) | comGC/cglC | 1860049..1860375 (-) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| L1A16_RS09595 (L1A16_09595) | comGB/cglB | 1860377..1861393 (-) | 1017 | WP_238881034.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| L1A16_RS09600 (L1A16_09600) | comGA/cglA/cilD | 1861341..1862282 (-) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| L1A16_RS09605 (L1A16_09605) | - | 1862358..1862723 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| L1A16_RS09610 (L1A16_09610) | - | 1862874..1863932 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15955.42 Da Isoelectric Point: 10.2472
>NTDB_id=645859 L1A16_RS09570 WP_000265624.1 1858572..1858985(-) (comGG/cglG) [Streptococcus pneumoniae strain ND6401]
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKVEQESGEQVFNLGQVSYQNKK
TGLVTRVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
Nucleotide
Download Length: 414 bp
>NTDB_id=645859 L1A16_RS09570 WP_000265624.1 1858572..1858985(-) (comGG/cglG) [Streptococcus pneumoniae strain ND6401]
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCCATCTTTAGTCTTTTGTTGCA
ATTTTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCTATGGCTA
AACGAACCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTAGTGACGAGGGTTCGTACGGATAAGAGCCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus pneumoniae Rx1 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae D39 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae R6 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
99.27 |
100 |
0.993 |
| comGG/cglG | Streptococcus mitis SK321 |
87.591 |
100 |
0.876 |
| comGG/cglG | Streptococcus mitis NCTC 12261 |
89.256 |
88.321 |
0.788 |
| comYG | Streptococcus mutans UA140 |
38.806 |
97.81 |
0.38 |
| comYG | Streptococcus mutans UA159 |
38.806 |
97.81 |
0.38 |