Detailed information NTG0645826

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: L1A16_RS04280
• Genome accession: NZ_CP090885
• Coordinates: 851953..852906 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495909.1
• Uniprot ID: A0A0H2UPP6
• Organism: Streptococcus pneumoniae strain ND6401
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 846953..857906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1A16_RS04255 (L1A16_04255)	rpmG	847696..847845 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
L1A16_RS04260 (L1A16_04260)	secG	847885..848118 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
L1A16_RS04265 (L1A16_04265)	rnr	848220..850574 (+)	2355	WP_000654920.1	ribonuclease R	-
L1A16_RS04270 (L1A16_04270)	smpB	850537..851004 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
L1A16_RS04275 (L1A16_04275)	tehB	851020..851880 (+)	861	WP_000413769.1	SAM-dependent methyltransferase TehB	-
L1A16_RS04280 (L1A16_04280)	coiA	851953..852906 (+)	954	WP_000495909.1	competence protein CoiA	Machinery gene
L1A16_RS04285 (L1A16_04285)	pepF	852925..854727 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
L1A16_RS04290 (L1A16_04290)	-	854729..855442 (+)	714	WP_000230399.1	O-methyltransferase	-
L1A16_RS04295 (L1A16_04295)	prsA	855509..856450 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
L1A16_RS04300 (L1A16_04300)	-	856569..856910 (-)	342	Protein_858	IS3 family transposase	-
L1A16_RS04305 (L1A16_04305)	-	857323..857418 (+)	96	Protein_859	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=645826 L1A16_RS04280 WP_000495909.1 851953..852906(+) (coiA) [Streptococcus pneumoniae strain ND6401]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=645826 L1A16_RS04280 WP_000495909.1 851953..852906(+) (coiA) [Streptococcus pneumoniae strain ND6401]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

3D structure

• AlphaFold DB: A0A0H2UPP6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	100	100	1
coiA	Streptococcus pneumoniae Rx1	99.369	100	0.994
coiA	Streptococcus pneumoniae D39	99.369	100	0.994
coiA	Streptococcus pneumoniae R6	99.369	100	0.994
coiA	Streptococcus mitis NCTC 12261	89.274	100	0.893
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435