Detailed information NTG0645016

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OGT51_RS00425
• Genome accession: NZ_CP107728
• Coordinates: 78003..79121 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB44
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 73003..84121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGT51_RS00415 (OGT51_00415)	-	76119..76811 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
OGT51_RS00420 (OGT51_00420)	pilT	76938..77975 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
OGT51_RS00425 (OGT51_00425)	pilU	78003..79121 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OGT51_RS00430 (OGT51_00430)	fur	79191..79628 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
OGT51_RS00435 (OGT51_00435)	-	79740..80138 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
OGT51_RS00440 (OGT51_00440)	-	80193..80516 (-)	324	WP_000442587.1	RnfH family protein	-
OGT51_RS00445 (OGT51_00445)	-	80516..81583 (-)	1068	WP_002019572.1	hypothetical protein	-
OGT51_RS00450 (OGT51_00450)	-	81736..82191 (-)	456	WP_000782976.1	bacteriohemerythrin	-
OGT51_RS00455 (OGT51_00455)	-	82444..83292 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=645016 OGT51_RS00425 WP_000347039.1 78003..79121(+) (pilU) [Acinetobacter baumannii strain AB44]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=645016 OGT51_RS00425 WP_000347039.1 78003..79121(+) (pilU) [Acinetobacter baumannii strain AB44]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395