Detailed information NTG0644127

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: OIO74_RS13950
• Genome accession: NZ_CP107593
• Coordinates: 2946357..2947475 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347037.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 1326580
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2941357..2952475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIO74_RS13940 (OIO74_13940)	-	2944473..2945165 (-)	693	WP_001108505.1	YggS family pyridoxal phosphate-dependent enzyme	-
OIO74_RS13945 (OIO74_13945)	pilT	2945292..2946329 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
OIO74_RS13950 (OIO74_13950)	pilU	2946357..2947475 (+)	1119	WP_000347037.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
OIO74_RS13955 (OIO74_13955)	fur	2947545..2947982 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
OIO74_RS13960 (OIO74_13960)	-	2948094..2948492 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
OIO74_RS13965 (OIO74_13965)	-	2948547..2948870 (-)	324	WP_000442589.1	RnfH family protein	-
OIO74_RS13970 (OIO74_13970)	-	2948870..2949937 (-)	1068	WP_029777564.1	membrane protein	-
OIO74_RS13975 (OIO74_13975)	-	2950090..2950545 (-)	456	WP_000782976.1	bacteriohemerythrin	-
OIO74_RS13980 (OIO74_13980)	-	2950798..2951646 (-)	849	WP_000336552.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41919.10 Da
• Isoelectric Point: 6.6943

>NTDB_id=644127 OIO74_RS13950 WP_000347037.1 2946357..2947475(+) (pilU) [Acinetobacter baumannii strain 1326580]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=644127 OIO74_RS13950 WP_000347037.1 2946357..2947475(+) (pilU) [Acinetobacter baumannii strain 1326580]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACTAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ATGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392