Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LXM91_RS05760 Genome accession   NZ_CP090477
Coordinates   1104171..1104827 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain W0101     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099171..1109827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM91_RS05730 (LXM91_05730) oppF 1099701..1100618 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LXM91_RS05735 (LXM91_05735) - 1100725..1101912 (+) 1188 WP_015239569.1 putative glycoside hydrolase -
  LXM91_RS05740 (LXM91_05740) - 1102030..1102608 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  LXM91_RS05745 (LXM91_05745) spx 1102786..1103181 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  LXM91_RS05750 (LXM91_05750) - 1103239..1103895 (-) 657 WP_007409109.1 TerC family protein -
  LXM91_RS05760 (LXM91_05760) mecA 1104171..1104827 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  LXM91_RS05765 (LXM91_05765) - 1104978..1106138 (+) 1161 WP_039251993.1 competence protein CoiA family protein -
  LXM91_RS05770 (LXM91_05770) pepF 1106366..1108195 (+) 1830 WP_099686889.1 oligoendopeptidase F Regulator
  LXM91_RS05775 (LXM91_05775) - 1108232..1108399 (-) 168 WP_003155026.1 hypothetical protein -
  LXM91_RS05780 (LXM91_05780) spxH 1108686..1109588 (-) 903 WP_039251990.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=642689 LXM91_RS05760 WP_003155032.1 1104171..1104827(+) (mecA) [Bacillus amyloliquefaciens strain W0101]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=642689 LXM91_RS05760 WP_003155032.1 1104171..1104827(+) (mecA) [Bacillus amyloliquefaciens strain W0101]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895