Detailed information NTG0641623

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LXN49_RS16355
• Genome accession: NZ_CP090354
• Coordinates: 3215526..3216701 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain H31R-08
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3210526..3221701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXN49_RS16325 (LXN49_16325)	-	3210695..3211114 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
LXN49_RS16330 (LXN49_16330)	comFC	3211171..3211827 (-)	657	WP_231506847.1	ComF family protein	Machinery gene
LXN49_RS16335 (LXN49_16335)	-	3211854..3212147 (-)	294	WP_024426256.1	late competence development ComFB family protein	-
LXN49_RS16340 (LXN49_16340)	comFA	3212196..3213593 (-)	1398	WP_311165396.1	DEAD/DEAH box helicase	Machinery gene
LXN49_RS16345 (LXN49_16345)	-	3213714..3214556 (-)	843	WP_024423625.1	DegV family protein	-
LXN49_RS16350 (LXN49_16350)	degU	3214772..3215461 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
LXN49_RS16355 (LXN49_16355)	degS	3215526..3216701 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
LXN49_RS16360 (LXN49_16360)	-	3216922..3217590 (+)	669	WP_012011434.1	YigZ family protein	-
LXN49_RS16365 (LXN49_16365)	-	3217575..3218666 (+)	1092	WP_024423626.1	LCP family protein	-
LXN49_RS16370 (LXN49_16370)	-	3218702..3219769 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
LXN49_RS16375 (LXN49_16375)	tuaH	3219904..3221100 (-)	1197	WP_024426259.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=641623 LXN49_RS16355 WP_003213166.1 3215526..3216701(-) (degS) [Bacillus safensis strain H31R-08]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=641623 LXN49_RS16355 WP_003213166.1 3215526..3216701(-) (degS) [Bacillus safensis strain H31R-08]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGAAGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGTCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTTCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841